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Source: busco
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Build-Depends: debhelper-compat (= 13),
dh-sequence-python3,
python3-all,
python3-biopython <!nocheck>,
python3-pandas <!nocheck>,
python3-setuptools,
hmmer
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/busco
Vcs-Git: https://salsa.debian.org/med-team/busco.git
Homepage: https://gitlab.com/ezlab/busco
Rules-Requires-Root: no
Package: busco
Architecture: any
Depends: ${python3:Depends},
${misc:Depends},
python3-pandas,
python3-biopython,
hmmer,
prodigal,
bbmap
Description: benchmarking sets of universal single-copy orthologs
Assessing genome assembly and annotation completeness with Benchmarking
Universal Single-Copy Orthologs (BUSCO).
.
* Automated selection of lineages issued from https://www.orthodb.org/
* Automated download of all necessary files and datasets to conduct a run
* Use prodigal for non-eukaryotic genomes
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