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Source: fermi-lite
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Sascha Steinbiss <satta@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
d-shlibs,
zlib1g-dev,
libsimde-dev,
help2man
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/fermi-lite
Vcs-Git: https://salsa.debian.org/med-team/fermi-lite.git
Homepage: https://github.com/lh3/fermi-lite
Rules-Requires-Root: no
Package: fml-asm
Architecture: any
Depends: ${misc:Depends},
${shlibs:Depends},
zlib1g
Description: tool for assembling Illumina short reads in small regions
Fml-asm is a command-line tool for assembling Illumina short reads in regions
from 100bp to 10 million bp in size, based on the fermi-lite library.
It is largely a light-weight in-memory version of fermikit without
generating any intermediate files. It inherits the performance, the relatively
small memory footprint and the features of fermikit. In particular, fermi-lite
is able to retain heterozygous events and thus can be used to assemble diploid
regions for the purpose of variant calling.
Package: libfml0
Section: libs
Architecture: any
Multi-Arch: same
Depends: ${shlibs:Depends},
${misc:Depends},
zlib1g
Description: library for assembling Illumina short reads in small regions
Fermi-lite is a standalone C library tool for assembling Illumina short
reads in regions from 100bp to 10 million bp in size.
.
This package contains a shared library offering the fermi-lite API to custom C
programs.
Package: libfml-dev
Section: libdevel
Architecture: any
Multi-Arch: same
Depends: ${misc:Depends},
libfml0 (= ${binary:Version}),
zlib1g-dev,
${devlibs:Depends}
Description: development headers for libfml
Fermi-lite is a standalone C library tool for assembling Illumina short
reads in regions from 100bp to 10 million bp in size.
.
This package contains the C library headers for using libfml in custom tools,
along with a static library.
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