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Source: ont-fast5-api
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Nilesh Patra <nilesh@debian.org>
Build-Depends: debhelper-compat (= 13),
dh-sequence-python3,
python3-all-dev,
python3-setuptools,
python3-h5py,
python3-numpy,
python3-progressbar,
python3-packaging,
libvbz-hdf-plugin-dev
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/ont-fast5-api
Vcs-Git: https://salsa.debian.org/med-team/ont-fast5-api.git
Homepage: https://github.com/nanoporetech/ont_fast5_api/
Rules-Requires-Root: no
Package: ont-fast5-api
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
${python3:Depends},
python3-progressbar,
libvbz-hdf-plugin-dev,
python3-h5py
Description: simple interface to HDF5 files of the Oxford Nanopore .fast5 file format
Ont_fast5_api is a simple interface to HDF5 files of the Oxford
Nanopore .fast5 file format.
.
It provides:
.
* Concrete implementation of the fast5 file schema using the generic h5py
library
* Plain-english-named methods to interact with and reflect the fast5 file
schema
* Tools to convert between multi_read and single_read formats
* Tools to compress/decompress raw data in files
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