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Source: python-bioframe
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
Nilesh Patra <nilesh@debian.org>,
Section: science
Priority: optional
Build-Depends:
debhelper-compat (= 13),
dh-sequence-python3,
python3-all,
python3-matplotlib,
python3-numpy,
python3-pandas,
python3-pytest <!nocheck>,
python3-requests,
python3-setuptools,
python3-wheel,
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/python-bioframe
Vcs-Git: https://salsa.debian.org/med-team/python-bioframe.git
Homepage: https://github.com/open2c/bioframe
Rules-Requires-Root: no
X-Style: black
Package: python3-bioframe
Architecture: all
Depends:
python3-pkg-resources,
${misc:Depends},
${python3:Depends},
${shlibs:Depends},
Description: library to enable flexible, scalable operations on genomic interval dataframes
Building bioframe directly on top of pandas enables immediate access
to a rich set of dataframe operations. Working in Python enables
rapid visualization (e.g. matplotlib, seaborn) and iteration of
genomic analyses.
.
Bioframe implements a variety of genomic interval operations directly on
dataframes. Bioframe also includes functions for loading diverse genomic
data formats, and performing operations on special classes of genomic
intervals, including chromosome arms and fixed size bins.
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