1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
|
Source: r-cran-sctransform
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Steffen Moeller <moeller@debian.org>
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Priority: optional
Build-Depends: debhelper-compat (= 13),
dh-r,
r-base-dev,
r-cran-dplyr,
r-cran-magrittr,
r-cran-mass,
r-cran-matrix (>= 1.5-0),
r-cran-future.apply,
r-cran-future,
r-cran-ggplot2,
r-cran-reshape2,
r-cran-rlang,
r-cran-gridextra,
r-cran-matrixstats,
r-cran-rcpparmadillo,
r-cran-rcpp
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-cran-sctransform
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-cran-sctransform.git
Homepage: https://cran.r-project.org/package=sctransform
Rules-Requires-Root: no
Package: r-cran-sctransform
Architecture: any
Depends: ${R:Depends},
${shlibs:Depends},
${misc:Depends}
Recommends: ${R:Recommends}
Suggests: ${R:Suggests}
Description: Variance Stabilizing Transformations for Single Cell UMI Data
A normalization method for single-cell UMI count data using a
variance stabilizing transformation. The transformation is based on a
negative binomial regression model with regularized parameters. As part of the
same regression framework, this package also provides functions for
batch correction, and data correction. See Hafemeister and Satija 2019
<doi:10.1101/576827> for more details.
|
