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Source: uncalled
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Michael R. Crusoe <crusoe@debian.org>
Build-Depends: debhelper-compat (= 13),
python3-all,
python3-all-dev,
python3-setuptools,
# python3-read-until,
python3-pybind11,
python3-numpy,
pdqsort-dev,
dh-python,
libbwa-dev,
libhdf5-dev,
pkgconf,
libfast5-dev,
libtoml11-dev
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/uncalled
Vcs-Git: https://salsa.debian.org/med-team/uncalled.git
Homepage: https://github.com/skovaka/UNCALLED
Rules-Requires-Root: no
Package: uncalled
Architecture: any
Depends: ${python3:Depends}, ${shlibs:Depends}, ${misc:Depends}, python3-numpy
Description: Utility for Nanopore Current Alignment to Large Expanses of DNA
Streaming algorithm for mapping raw nanopore signal to DNA references
.
Enables real-time enrichment or depletion on Oxford Nanopore Technologies
(ONT) MinION runs via ReadUntil.
.
Also supports standalone signal mapping of fast5 reads
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