Description: a couple of verbosity switches added to help with the
 identification of a problem. This has now been resolved. This patch
 should be removed in one fo the next versions.
Auuthor: Steffen Moeller <moeller@debian.org>
Index: python-seqcluster/seqcluster/create_report.py
===================================================================
--- python-seqcluster.orig/seqcluster/create_report.py
+++ python-seqcluster/seqcluster/create_report.py
@@ -30,6 +30,6 @@ def report(args):
     logger.info("Creating profile (%s)" % profilesDir)
     data = make_profile(data, profilesDir, args)
     logger.info("Creating database")
-    make_database(data, "seqcluster.db", args.out)
+    make_database(data, "seqcluster.db", args.out, True)
 
     logger.info("Done. Download https://github.com/lpantano/seqclusterViz/archive/master.zip to browse the output.")
Index: python-seqcluster/seqcluster/db/__init__.py
===================================================================
--- python-seqcluster.orig/seqcluster/db/__init__.py
+++ python-seqcluster/seqcluster/db/__init__.py
@@ -107,9 +107,21 @@ def _close(con):
     if con:
         con.close()
 
-def make_database(data, name="seqcluster.db", out_dir="database"):
+def make_database(data, name="seqcluster.db", out_dir="database", verbose=False):
     out_dir = safe_dirs(out_dir)
     op.abspath(out_dir)
+
+    if verbose:
+        logger.info("make_database creates_db at %s" %  op.join(out_dir, name))
+
     con = _create_db(op.join(out_dir, name))
+
+    if verbose:
+        logger.info("make_database inserts data")
+
     _insert_data(con, data)
+
+    if verbose:
+        logger.info("make_database closes connection")
+
     _close(con)