Author: Andreas Tille <tille@debian.org>
Last-Update: Wed, 06 Dec 2023 14:28:23 +0100
Description: In Debian the scripts used by Assemblytics are installed to a different PATH

--- a/scripts/Assemblytics
+++ b/scripts/Assemblytics
@@ -60,7 +60,7 @@ mkdir -p ${OUTPUT_PREFIX%/*}/
 LOG_FILE=${OUTPUT_PREFIX%/*}/progress.log
 >&2 echo "Logging progress updates in $LOG_FILE"
 
-SCRIPT_PATH=$(dirname $BASH_SOURCE)
+SCRIPT_PATH=/usr/share/assemblytics/bin
 echo 'script path:' $SCRIPT_PATH
 
 # Check that Rscript is available (needed by R scripts)