Index of /data/main/b/bbmap/39.01+dfsg-2/current/align2

• Parent Directory
• AbstractIndex.java
• AbstractMapThread.java
• AbstractMapper.java
• BBIndex.java
• BBIndex5.java
• BBIndexAcc.java
• BBIndexPacBio.java
• BBIndexPacBioSkimmer.java
• BBMap.java
• BBMap5.java
• BBMapAcc.java
• BBMapPacBio.java
• BBMapPacBioSkimmer.java
• BBMapThread.java
• BBMapThread5.java
• BBMapThreadAcc.java
• BBMapThreadPacBio.java
• BBMapThreadPacBioSkimmer.java
• BBSplitter.java
• BBWrap.java
• BandedAligner.java
• BandedAlignerConcrete.java
• BandedAlignerJNI.java
• Blacklist.java
• Block.java
• ChromLoadThread.java
• CompareSamFiles.java
• CompressString.java
• GapTools.java
• GradeSamFile.java
• Index.java
• IndexMaker4.java
• IndexMaker5.java
• KeyRing.java
• MSA.java
• MakeQualityHistogram.java
• MakeRocCurve.java
• MultiStateAligner9Flat.java
• MultiStateAligner9PacBio.java
• MultiStateAligner9XFlat.java
• MultiStateAligner9ts.java
• MultiStateAligner10ts.java
• MultiStateAligner11ts.java
• MultiStateAligner11tsJNI.java
• NeedlemanWunsch.java
• PackedHeap.java
• Pointer.java
• PrintTime.java
• Quad.java
• Quad64.java
• Quad64Heap.java
• QuadHeap.java
• QualityTools.java
• RandomReads3.java
• RefToIndex.java
• ReformatBatchOutput.java
• ReformatBatchOutput2.java
• Solver.java
• SplitMappedReads.java
• TranslateColorspaceRead.java