Description: Fix passage of boost header paths to cmake
Author: Afif Elghraoui <afif@debian.org>
Forwarded: no
--- blasr.orig/utils/bax2bam/makefile
+++ blasr/utils/bax2bam/makefile
@@ -10,7 +10,7 @@
 all: ${CURDIR}/src/* ${CURDIR}/tests/src/*
 	@mkdir -p ${CURDIR}/build && \
 	 cd ${CURDIR}/build && \
-		cmake -DBOOST_ROOT=${BOOST_ROOT} \
+		cmake -DBoost_INCLUDE_DIRS=${BOOST_INC} \
           -DPacBioBAM_INCLUDE_DIRS=${PBBAM_INC} \
           -DHTSLIB_INCLUDE_DIRS=${HTSLIB_INC} \
           -DPacBioBAM_LIBRARIES=${PBBAM_LIB}/libpbbam${SH_LIB_EXT} \
--- blasr.orig/utils/bam2bax/makefile
+++ blasr/utils/bam2bax/makefile
@@ -10,7 +10,7 @@
 all: ${CURDIR}/src/*.cpp ${CURDIR}/src/*.h  ${CURDIR}/tests/src/*.cpp ${CURDIR}/tests/src/*.h
 	@mkdir -p ${CURDIR}/build && \
 	 cd ${CURDIR}/build && \
-		cmake -DBOOST_ROOT=${BOOST_ROOT} \
+		cmake -DBoost_INCLUDE_DIRS=${BOOST_INC} \
           -DPacBioBAM_INCLUDE_DIRS=${PBBAM_INC} \
           -DHTSLIB_INCLUDE_DIRS=${HTSLIB_INC} \
           -DPacBioBAM_LIBRARIES=${PBBAM_LIB}/libpbbam${SH_LIB_EXT} \