Please read README.Debian or the discussion at
   https://lists.debian.org/debian-med/2014/09/msg00031.html
about this difference

--- example5.out.orig	2014-09-03 11:27:25.000000000 +0200
+++ example5.out	2014-09-03 12:16:13.612777963 +0200
@@ -1,5 +1,5 @@
 -	gi|110640213|ref|NC_008253.1|	2852852	8:T>A
+-	gi|110640213|ref|NC_008253.1|	148810	10:A>G,13:C>G
 +	gi|110640213|ref|NC_008253.1|	1093035	2:T>G,15:A>T
 -	gi|110640213|ref|NC_008253.1|	905664	6:A>G,7:G>T
--	gi|110640213|ref|NC_008253.1|	148810	10:A>G,13:C>G
 -	gi|110640213|ref|NC_008253.1|	4930433	4:G>T,6:C>G