Recommended project directory structure for the DCMTK project ============================================================= dcmtk config docs include templates module1 apps # application programs data # support files docs # documentation etc # configuration files include # include directory libsrc # library sources tests # test programs module2 ... If you use this structure, copy from the config/templates directory Makefile.mod -> dcmtk/moduleX/Makefile.in configure.mod -> dcmtk/moduleX/configure They can be used without any changes if you are using the structure above. There are more files in the template directory: Makefile.lib: Sample Makefile.in for libraries in libsrc Makefile.src: Sample Makefile.in for applications in apps, tests More information about configure.mod can be found in modules.txt