Description: fix missing C function declarations.
Author: Étienne Mollier <emollier@debian.org>
Bug-Debian: https://bugs.debian.org/1066659
Forwarded: no
Last-Update: 2024-03-16
---
This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
--- dialign.orig/src/input.c
+++ dialign/src/input.c
@@ -17,6 +17,7 @@
 #include "define.h"
 #include "dialign.h"
 #include "alig_graph_closure.h"
+#include "pratique.h"
 
 extern int max_dia , self_comparison ; 
 extern int sim_score[21][21]; 
--- dialign.orig/src/anchor.c
+++ dialign/src/anchor.c
@@ -17,6 +17,7 @@
 #include "define.h"
 #include "dialign.h"
 #include "alig_graph_closure.h"
+#include "pratique.h"
 
 
 extern int  anc_num, *seqlen ;
--- dialign.orig/src/dialign.h
+++ dialign/src/dialign.h
@@ -66,4 +66,7 @@
 struct subtree { int member_num, valid ; int *member; char *name ;
                  float depth; };         
 
-
+void regex_parse( char *mot_regex );
+void seq_parse( char *mot_regex );
+void exclude_frg_read( char *file_name , int ***exclude_list);
+int word_count( char *seq ) ;
--- dialign.orig/src/dialign.c
+++ dialign/src/dialign.c
@@ -214,7 +214,6 @@
 /********************************/
 
  extern float mot_dist_factor ( int offset , float parameter ) ;
- extern int word_count( char *seq ) ; 
  extern void subst_mat(char *file_name, int fragno , struct  multi_frag *smp );
  extern int seq_read( char *in_file , char *sq[MAX_SEQNUM] , char **sqn , char **fsqn) ;
  extern int anc_read( char *file_name ) ;