IF( NOT ITK_DISABLE_CXX_TESTING ) IF(ITK_BINARY_DIR) IF(TCL_TCLSH) ADD_TEST(PrintSelf-Algorithms ${TCL_TCLSH} ${ITK_SOURCE_DIR}/Utilities/Dart/PrintSelfCheck.tcl ${ITK_SOURCE_DIR}/Code/Algorithms) ENDIF(TCL_TCLSH) ENDIF(ITK_BINARY_DIR) SET(BASELINE ${ITK_DATA_ROOT}/Baseline/Algorithms) SET(INPUTDATA ${ITK_DATA_ROOT}/Input) SET(TEMP ${ITKTesting_BINARY_DIR}/Temporary) SET(ALGORITHMS_TESTS ${CXX_TEST_PATH}/itkAlgorithmsTests) SET(ALGORITHMS_TESTS2 ${CXX_TEST_PATH}/itkAlgorithmsTests2) SET(ALGORITHMS_TESTS3 ${CXX_TEST_PATH}/itkAlgorithmsTests3) SET(ALGORITHMS_TESTS4 ${CXX_TEST_PATH}/itkAlgorithmsTests4) SET(ALGORITHMS_PRINT_TEST ${CXX_TEST_PATH}/itkAlgorithmsPrintTest) SET(ALGORITHMS_PRINT_TEST2 ${CXX_TEST_PATH}/itkAlgorithmsPrintTest2) SET(ALGORITHMS_PRINT_TEST3 ${CXX_TEST_PATH}/itkAlgorithmsPrintTest3) SET(ALGORITHMS_PRINT_TEST4 ${CXX_TEST_PATH}/itkAlgorithmsPrintTest4) SET(ALGORITHMS_HEADER_TESTS ${CXX_TEST_PATH}/itkAlgorithmsHeaderTest) ADD_TEST(itkAlgorithmsPrintTest ${ALGORITHMS_PRINT_TEST}) ADD_TEST(itkAlgorithmsPrintTest2 ${ALGORITHMS_PRINT_TEST2}) ADD_TEST(itkAlgorithmsPrintTest3 ${ALGORITHMS_PRINT_TEST3}) ADD_TEST(itkAlgorithmsPrintTest4 ${ALGORITHMS_PRINT_TEST4}) ADD_TEST(itkAnisotropicFourthOrderLevelSetImageFilterTest ${ALGORITHMS_TESTS} itkAnisotropicFourthOrderLevelSetImageFilterTest) ADD_TEST(itkAntiAliasBinaryImageFilterTest ${ALGORITHMS_TESTS} itkAntiAliasBinaryImageFilterTest) ADD_TEST(itkAutomaticTopologyMeshSourceTest ${ALGORITHMS_TESTS} itkAutomaticTopologyMeshSourceTest) ADD_TEST(itkBinaryMinMaxCurvatureFlowImageFilterTest ${ALGORITHMS_TESTS} itkBinaryMinMaxCurvatureFlowImageFilterTest ) ADD_TEST(itkBinaryMask3DMeshSourceTest ${ALGORITHMS_TESTS} itkBinaryMask3DMeshSourceTest ) ADD_TEST(itkBioCellTest ${ALGORITHMS_TESTS} itkBioCellTest ) ADD_TEST(itkBioCellularAggregateTest ${ALGORITHMS_TESTS} itkBioCellularAggregateTest ) ADD_TEST(itkBioGeneTest ${ALGORITHMS_TESTS} itkBioGeneTest ) ADD_TEST(itkBioGenomeTest ${ALGORITHMS_TESTS} itkBioGenomeTest ) ADD_TEST(itkBioGeneNetworkTest ${ALGORITHMS_TESTS} itkBioGeneNetworkTest ) ADD_TEST(itkCannySegmentationLevelSetImageFilterTest ${ALGORITHMS_TESTS} itkCannySegmentationLevelSetImageFilterTest) ADD_TEST(itkCorrelationCoefficientHistogramImageToImageMetricTest ${ALGORITHMS_TESTS} itkCorrelationCoefficientHistogramImageToImageMetricTest) ADD_TEST(itkCompareHistogramImageToImageMetricTest ${ALGORITHMS_TESTS2} itkCompareHistogramImageToImageMetricTest) ADD_TEST(itkCurvesLevelSetImageFilterTest ${ALGORITHMS_TESTS} itkCurvesLevelSetImageFilterTest) ADD_TEST(itkDemonsRegistrationFilterTest ${ALGORITHMS_TESTS} itkDemonsRegistrationFilterTest) ADD_TEST(itkExtensionVelocitiesImageFilterTest ${ALGORITHMS_TESTS} itkExtensionVelocitiesImageFilterTest) ADD_TEST(itkExtractMeshConnectedRegionsTest ${ALGORITHMS_TESTS} itkExtractMeshConnectedRegionsTest) ADD_TEST(itkFastChamferDistanceImageFilterTest ${ALGORITHMS_TESTS} itkFastChamferDistanceImageFilterTest) ADD_TEST(itkFastMarchingTest ${ALGORITHMS_TESTS} itkFastMarchingTest) ADD_TEST(itkFastMarchingExtensionImageFilterTest ${ALGORITHMS_TESTS} itkFastMarchingExtensionImageFilterTest) ADD_TEST(itkFastMarchingUpwindGradientTest ${ALGORITHMS_TESTS4} itkFastMarchingUpwindGradientTest) ADD_TEST(itkCollidingFrontsImageFilterTest ${ALGORITHMS_TESTS4} itkCollidingFrontsImageFilterTest) ADD_TEST(itkCurvesLevelSetImageFilterZeroSigmaTest ${ALGORITHMS_TESTS4} itkCurvesLevelSetImageFilterZeroSigmaTest) ADD_TEST(itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest ${ALGORITHMS_TESTS4} itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest) ADD_TEST(itkLabelVotingImageFilterTest ${ALGORITHMS_TESTS4} itkLabelVotingImageFilterTest) ADD_TEST(itkFEMRegistrationFilterTest ${ALGORITHMS_TESTS} itkFEMRegistrationFilterTest) ADD_TEST(itkGeodesicActiveContourLevelSetImageFilterTest ${ALGORITHMS_TESTS} itkGeodesicActiveContourLevelSetImageFilterTest) ADD_TEST(itkGeodesicActiveContourShapePriorLevelSetImageFilterTest ${ALGORITHMS_TESTS} itkGeodesicActiveContourShapePriorLevelSetImageFilterTest) ADD_TEST(itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2 ${ALGORITHMS_TESTS} itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2) ADD_TEST(itkGradientVectorFlowImageFilterTest ${ALGORITHMS_TESTS} itkGradientVectorFlowImageFilterTest) ADD_TEST(itkGradientDifferenceImageToImageMetricTest ${ALGORITHMS_TESTS2} itkGradientDifferenceImageToImageMetricTest) ADD_TEST(itkHistogramMatchingImageFilterTest ${ALGORITHMS_TESTS} itkHistogramMatchingImageFilterTest) ADD_TEST(itkHistogramImageToImageMetricTest ${ALGORITHMS_TESTS} itkHistogramImageToImageMetricTest) ADD_TEST(itkImageMomentsTest ${ALGORITHMS_TESTS} itkImageMomentsTest) ADD_TEST(itkImagePCAShapeModelEstimatorTest ${ALGORITHMS_TESTS2} itkImagePCAShapeModelEstimatorTest) ADD_TEST(itkImagePCADecompositionCalculatorTest ${ALGORITHMS_TESTS2} itkImagePCADecompositionCalculatorTest) ADD_TEST(itkImageRegistrationMethodTest ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest ) ADD_TEST(itkImageRegistrationMethodTest_1 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_1) ADD_TEST(itkImageRegistrationMethodTest_2 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_2) ADD_TEST(itkImageRegistrationMethodTest_3 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_3) ADD_TEST(itkImageRegistrationMethodTest_4 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_4) ADD_TEST(itkImageRegistrationMethodTest_5 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_5) ADD_TEST(itkImageRegistrationMethodTest_6 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_6) ADD_TEST(itkImageRegistrationMethodTest_7 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_7) ADD_TEST(itkImageRegistrationMethodTest_8 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_8) ADD_TEST(itkImageRegistrationMethodTest_9 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_9) ADD_TEST(itkImageRegistrationMethodTest_10 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_10) ADD_TEST(itkImageRegistrationMethodTest_11 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_11) ADD_TEST(itkImageRegistrationMethodTest_12 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_12) ADD_TEST(itkImageRegistrationMethodTest_13 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_13) ADD_TEST(itkImageRegistrationMethodTest_14 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_14) ADD_TEST(itkImageRegistrationMethodTest_15 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_15) ADD_TEST(itkImageRegistrationMethodTest_16 ${ALGORITHMS_TESTS} itkImageRegistrationMethodTest_16) ADD_TEST(itkInterpolateTest ${ALGORITHMS_TESTS} itkInterpolateTest) ADD_TEST(itkIsoContourDistanceImageFilterTest ${ALGORITHMS_TESTS} itkIsoContourDistanceImageFilterTest) ADD_TEST(itkIsotropicFourthOrderLevelSetImageFilterTest ${ALGORITHMS_TESTS} itkIsotropicFourthOrderLevelSetImageFilterTest) ADD_TEST(itkKalmanLinearEstimatorTest ${ALGORITHMS_TESTS} itkKalmanLinearEstimatorTest) ADD_TEST(itkKmeansModelEstimatorTest ${ALGORITHMS_TESTS} itkKmeansModelEstimatorTest) ADD_TEST(itkKullbackLeiblerCompareHistogramImageToImageMetricTest ${ALGORITHMS_TESTS2} itkKullbackLeiblerCompareHistogramImageToImageMetricTest) ADD_TEST(itkLaplacianSegmentationLevelSetImageFilterTest ${ALGORITHMS_TESTS} itkLaplacianSegmentationLevelSetImageFilterTest) ADD_TEST(itkLevelSetNeighborhoodExtractorTest ${ALGORITHMS_TESTS} itkLevelSetNeighborhoodExtractorTest) ADD_TEST(itkLevelSetVelocityNeighborhoodExtractorTest ${ALGORITHMS_TESTS} itkLevelSetVelocityNeighborhoodExtractorTest) ADD_TEST(itkMattesMutualInformationImageToImageMetricTest ${ALGORITHMS_TESTS3} itkMattesMutualInformationImageToImageMetricTest 1 1) ADD_TEST(itkMattesMutualInformationImageToImageMetricTest2 ${ALGORITHMS_TESTS3} itkMattesMutualInformationImageToImageMetricTest 1 0) ADD_TEST(itkMattesMutualInformationImageToImageMetricTest3 ${ALGORITHMS_TESTS3} itkMattesMutualInformationImageToImageMetricTest 0 1) ADD_TEST(itkMattesMutualInformationImageToImageMetricTest4 ${ALGORITHMS_TESTS3} itkMattesMutualInformationImageToImageMetricTest 0 0) ADD_TEST(itkMeanSquaresImageMetricTest ${ALGORITHMS_TESTS3} itkMeanSquaresImageMetricTest) ADD_TEST(itkMeanSquaresHistogramImageToImageMetricTest ${ALGORITHMS_TESTS3} itkMeanSquaresHistogramImageToImageMetricTest) ADD_TEST(itkMinMaxCurvatureFlowImageFilterTest ${ALGORITHMS_TESTS3} itkMinMaxCurvatureFlowImageFilterTest) ADD_TEST(itkMRFImageFilterTest ${ALGORITHMS_TESTS3} itkMRFImageFilterTest) ADD_TEST(itkMRIBiasFieldCorrectionFilterTest ${ALGORITHMS_TESTS3} itkMRIBiasFieldCorrectionFilterTest) ADD_TEST(itkMultiResolutionPyramidImageFilterTest ${ALGORITHMS_TESTS3} itkMultiResolutionPyramidImageFilterTest) ADD_TEST(itkMutualInformationHistogramImageToImageMetricTest ${ALGORITHMS_TESTS3} itkMutualInformationHistogramImageToImageMetricTest) ADD_TEST(itkRecursiveMultiResolutionPyramidImageFilterTest ${ALGORITHMS_TESTS3} itkRecursiveMultiResolutionPyramidImageFilterTest) ADD_TEST(itkMultiResolutionPDEDeformableRegistrationTest ${ALGORITHMS_TESTS3} itkMultiResolutionPDEDeformableRegistrationTest) ADD_TEST(itkMultiResolutionImageRegistrationMethodTest ${ALGORITHMS_TESTS3} itkMultiResolutionImageRegistrationMethodTest ) ADD_TEST(itkMultiResolutionImageRegistrationMethodTest_1 ${ALGORITHMS_TESTS3} itkMultiResolutionImageRegistrationMethodTest_1 ) ADD_TEST(itkMultiResolutionImageRegistrationMethodTest_2 ${ALGORITHMS_TESTS3} itkMultiResolutionImageRegistrationMethodTest_2 ) ADD_TEST(itkMutualInformationMetricTest ${ALGORITHMS_TESTS3} itkMutualInformationMetricTest) ADD_TEST(itkNarrowBandCurvesLevelSetImageFilterTest1 ${ALGORITHMS_TESTS4} --compare ${BASELINE}/itkNarrowBandCurvesLevelSetImageFilterTest.png ${TEMP}/itkNarrowBandCurvesLevelSetImageFilterTest.png itkNarrowBandCurvesLevelSetImageFilterTest ${TEMP}/itkNarrowBandCurvesLevelSetImageFilterTest.png) ADD_TEST(itkNarrowBandThresholdSegmentationLevelSetImageFilterTest ${ALGORITHMS_TESTS2} itkNarrowBandThresholdSegmentationLevelSetImageFilterTest) ADD_TEST(itkNewTest ${ALGORITHMS_TESTS3} itkNewTest) ADD_TEST(itkNormalizedCorrelationImageMetricTest ${ALGORITHMS_TESTS3} itkNormalizedCorrelationImageMetricTest) ADD_TEST(itkNormalizedCorrelationPointSetToImageMetricTest ${ALGORITHMS_TESTS3} itkNormalizedCorrelationPointSetToImageMetricTest) ADD_TEST(itkMeanSquaresPointSetToImageMetricTest ${ALGORITHMS_TESTS3} itkMeanSquaresPointSetToImageMetricTest) ADD_TEST(itkMeanReciprocalSquareDifferencePointSetToImageMetricTest ${ALGORITHMS_TESTS4} itkMeanReciprocalSquareDifferencePointSetToImageMetricTest) ADD_TEST(itkNormalizedMutualInformationHistogramImageToImageMetricTest ${ALGORITHMS_TESTS3} itkNormalizedMutualInformationHistogramImageToImageMetricTest) ADD_TEST(itkOtsuThresholdImageCalculatorTest ${ALGORITHMS_TESTS3} itkOtsuThresholdImageCalculatorTest) ADD_TEST(itkOtsuMultipleThresholdsCalculatorTest ${ALGORITHMS_TESTS2} itkOtsuMultipleThresholdsCalculatorTest) ADD_TEST(itkOrthogonalSwath2DPathFilterTest ${ALGORITHMS_TESTS3} itkOrthogonalSwath2DPathFilterTest) ADD_TEST(itkMeanReciprocalSquareDifferenceImageMetricTest ${ALGORITHMS_TESTS3} itkMeanReciprocalSquareDifferenceImageMetricTest) ADD_TEST(itkPointSetToImageRegistrationTest_1 ${ALGORITHMS_TESTS3} itkPointSetToImageRegistrationTest_1) ADD_TEST(itkRegionGrow2DTest ${ALGORITHMS_TESTS3} itkRegionGrow2DTest) ADD_TEST(itkReinitializeLevelSetImageFilterTest ${ALGORITHMS_TESTS3} itkReinitializeLevelSetImageFilterTest) ADD_TEST(itkRegularSphereMeshSourceTest ${ALGORITHMS_TESTS2} itkRegularSphereMeshSourceTest) ADD_TEST(itkRayCastInterpolateImageFunctionTest ${ALGORITHMS_TESTS2} itkRayCastInterpolateImageFunctionTest) ADD_TEST(itkSimplexMeshVolumeCalculatorTest ${ALGORITHMS_TESTS2} itkSimplexMeshVolumeCalculatorTest) ADD_TEST(itkShapeDetectionLevelSetImageFilterTest ${ALGORITHMS_TESTS3} itkShapeDetectionLevelSetImageFilterTest) ADD_TEST(itkShapePriorMAPCostFunctionTest ${ALGORITHMS_TESTS3} itkShapePriorMAPCostFunctionTest) ADD_TEST(itkShapePriorSegmentationLevelSetFunctionTest ${ALGORITHMS_TESTS3} itkShapePriorSegmentationLevelSetFunctionTest) ADD_TEST(itkSpatialObjectToImageRegistrationTest ${ALGORITHMS_TESTS3} itkSpatialObjectToImageRegistrationTest) ADD_TEST(itkSupervisedImageClassifierTest ${ALGORITHMS_TESTS3} itkSupervisedImageClassifierTest) ADD_TEST( itkThresholdMaximumConnectedComponentsImageFilterTest1 ${ALGORITHMS_TESTS4} --compare ${BASELINE}/itkThresholdMaximumConnectedComponentsImageFilterTest1.png ${TEMP}/itkThresholdMaximumConnectedComponentsImageFilterTest1.png itkThresholdMaximumConnectedComponentsImageFilterTest ${INPUTDATA}/CellsFluorescence1.png ${TEMP}/itkThresholdMaximumConnectedComponentsImageFilterTest1.png 10) ADD_TEST( itkThresholdMaximumConnectedComponentsImageFilterTest2 ${ALGORITHMS_TESTS4} --compare ${BASELINE}/itkThresholdMaximumConnectedComponentsImageFilterTest2.png ${TEMP}/itkThresholdMaximumConnectedComponentsImageFilterTest2.png itkThresholdMaximumConnectedComponentsImageFilterTest ${INPUTDATA}/CellsFluorescence2.png ${TEMP}/itkThresholdMaximumConnectedComponentsImageFilterTest2.png 10) ADD_TEST(itkThresholdSegmentationLevelSetImageFilterTest ${ALGORITHMS_TESTS2} itkThresholdSegmentationLevelSetImageFilterTest) ADD_TEST(itkGibbsTest ${ALGORITHMS_TESTS3} itkGibbsTest) ADD_TEST(itkDeformableTest ${ALGORITHMS_TESTS3} itkDeformableTest) ADD_TEST(itkDeformableSimplexMesh3DBalloonForceFilterTest ${ALGORITHMS_TESTS2} itkDeformableSimplexMesh3DBalloonForceFilterTest) ADD_TEST(itkDeformableSimplexMesh3DGradientConstaintForceFilterTest ${ALGORITHMS_TESTS2} itkDeformableSimplexMesh3DGradientConstraintForceFilterTest) ADD_TEST(itkDeformableSimplexMesh3DFilterTest ${ALGORITHMS_TESTS2} itkDeformableSimplexMesh3DFilterTest) ADD_TEST(itk2DDeformableTest ${ALGORITHMS_TESTS3} itk2DDeformableTest) ADD_TEST(itkBinaryThinningImageFilterTest ${ALGORITHMS_TESTS3} --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/BinaryThinningImageFilterTest.png ${ITK_TEST_OUTPUT_DIR}/BinaryThinningImageFilterTest.png itkBinaryThinningImageFilterTest ${ITK_DATA_ROOT}/Input/Shapes.png ${ITK_TEST_OUTPUT_DIR}/BinaryThinningImageFilterTest.png ) ADD_TEST(itkSphereMeshSourceTest ${ALGORITHMS_TESTS3} itkSphereMeshSourceTest) ADD_TEST(itkUnsharpMaskLevelSetImageFilterTest ${ALGORITHMS_TESTS3} itkUnsharpMaskLevelSetImageFilterTest) ADD_TEST(itkVnlFFTTest ${ALGORITHMS_TESTS4} itkVnlFFTTest) IF(USE_FFTWF) ADD_TEST(itkFFTWF_FFTTest ${ALGORITHMS_TESTS4} itkFFTWF_FFTTest) ENDIF(USE_FFTWF) IF(USE_FFTWD) ADD_TEST(itkFFTWD_FFTTest ${ALGORITHMS_TESTS4} itkFFTWD_FFTTest) ENDIF(USE_FFTWD) IF(USE_FFTWD) ADD_TEST(itkCurvatureRegistrationFilterTest ${ALGORITHMS_TESTS4} itkCurvatureRegistrationFilterTest) ENDIF(USE_FFTWD) IF(USE_SCSL) ADD_TEST(itkSCSLFFTTest ${ALGORITHMS_TESTS4} itkSCSLFFTTest) ENDIF(USE_SCSL) ADD_TEST(itkMIRegistrationFunctionTest ${ALGORITHMS_TESTS2} itkMIRegistrationFunctionTest) ADD_TEST(itkSymmetricForcesDemonsRegistrationFilterTest ${ALGORITHMS_TESTS2} itkSymmetricForcesDemonsRegistrationFilterTest) ADD_TEST(itkVoronoiDiagram2DTest ${ALGORITHMS_TESTS2} itkVoronoiDiagram2DTest) ADD_TEST(itkVoronoiSegmentationImageFilterTest ${ALGORITHMS_TESTS2} itkVoronoiSegmentationImageFilterTest) ADD_TEST(itkWatershedImageFilterTest ${ALGORITHMS_TESTS4} itkWatershedImageFilterTest) ADD_TEST(itkPointSetToPointSetRegistrationTest ${ALGORITHMS_TESTS2} itkPointSetToPointSetRegistrationTest) ADD_TEST(itkPointSetToSpatialObjectDemonsRegistrationTest ${ALGORITHMS_TESTS2} itkPointSetToSpatialObjectDemonsRegistrationTest) ADD_TEST(itkCurvatureFlowTest ${ALGORITHMS_TESTS} itkCurvatureFlowTest ${ITK_TEST_OUTPUT_DIR}/itkCurvatureFlowTest.vtk) SET(AlgorithmsTest_SRCS itkAnisotropicFourthOrderLevelSetImageFilterTest.cxx itkAntiAliasBinaryImageFilterTest.cxx itkAutomaticTopologyMeshSourceTest.cxx itkBinaryMask3DMeshSourceTest.cxx itkBinaryMinMaxCurvatureFlowImageFilterTest.cxx itkBioCellTest.cxx itkBioCellularAggregateTest.cxx itkBioGeneNetworkTest.cxx itkBioGeneTest.cxx itkBioGenomeTest.cxx itkCannySegmentationLevelSetImageFilterTest.cxx itkCorrelationCoefficientHistogramImageToImageMetricTest.cxx itkCurvatureFlowTest.cxx itkCurvesLevelSetImageFilterTest.cxx itkDemonsRegistrationFilterTest.cxx itkExtensionVelocitiesImageFilterTest.cxx itkExtractMeshConnectedRegionsTest.cxx itkFEMRegistrationFilterTest.cxx itkFastChamferDistanceImageFilterTest.cxx itkFastMarchingExtensionImageFilterTest.cxx itkFastMarchingTest.cxx itkGeodesicActiveContourLevelSetImageFilterTest.cxx itkGeodesicActiveContourShapePriorLevelSetImageFilterTest.cxx itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2.cxx itkGradientVectorFlowImageFilterTest.cxx itkHistogramImageToImageMetricTest.cxx itkHistogramMatchingImageFilterTest.cxx itkImageMomentsTest.cxx itkImageRegistrationMethodTest.cxx itkImageRegistrationMethodTest_1.cxx itkImageRegistrationMethodTest_10.cxx itkImageRegistrationMethodTest_11.cxx itkImageRegistrationMethodTest_12.cxx itkImageRegistrationMethodTest_13.cxx itkImageRegistrationMethodTest_14.cxx itkImageRegistrationMethodTest_15.cxx itkImageRegistrationMethodTest_16.cxx itkImageRegistrationMethodTest_2.cxx itkImageRegistrationMethodTest_3.cxx itkImageRegistrationMethodTest_4.cxx itkImageRegistrationMethodTest_5.cxx itkImageRegistrationMethodTest_6.cxx itkImageRegistrationMethodTest_7.cxx itkImageRegistrationMethodTest_8.cxx itkImageRegistrationMethodTest_9.cxx itkInterpolateTest.cxx itkIsoContourDistanceImageFilterTest.cxx itkIsotropicFourthOrderLevelSetImageFilterTest.cxx itkKalmanLinearEstimatorTest.cxx itkKmeansModelEstimatorTest.cxx itkKullbackLeiblerCompareHistogramImageToImageMetricTest.cxx itkLaplacianSegmentationLevelSetImageFilterTest.cxx itkLevelSetNeighborhoodExtractorTest.cxx itkLevelSetVelocityNeighborhoodExtractorTest.cxx ) SET(AlgorithmsTest2_SRCS itkCompareHistogramImageToImageMetricTest.cxx itkDeformableSimplexMesh3DBalloonForceFilterTest.cxx itkDeformableSimplexMesh3DGradientConstraintForceFilterTest.cxx itkDeformableSimplexMesh3DFilterTest.cxx itkGradientDifferenceImageToImageMetricTest.cxx itkImagePCADecompositionCalculatorTest.cxx itkImagePCAShapeModelEstimatorTest.cxx itkIsolatedWatershedImageFilterTest.cxx itkKappaStatisticImageToImageMetricTest.cxx itkKullbackLeiblerCompareHistogramImageToImageMetricTest.cxx itkMIRegistrationFunctionTest.cxx itkMatchCardinalityImageToImageMetricTest.cxx itkNarrowBandThresholdSegmentationLevelSetImageFilterTest.cxx itkOtsuMultipleThresholdsCalculatorTest.cxx itkOtsuMultipleThresholdsImageFilterTest.cxx itkPointSetToPointSetRegistrationTest.cxx itkPointSetToSpatialObjectDemonsRegistrationTest.cxx itkRayCastInterpolateImageFunctionTest.cxx itkRegularSphereMeshSourceTest.cxx itkSTAPLEImageFilterTest.cxx itkSimplexMeshVolumeCalculatorTest.cxx itkSymmetricForcesDemonsRegistrationFilterTest.cxx itkThresholdSegmentationLevelSetImageFilterTest.cxx itkVoronoiDiagram2DTest.cxx itkVoronoiSegmentationImageFilterTest.cxx ) SET(AlgorithmsTest3_SRCS itk2DDeformableTest.cxx itkBinaryThinningImageFilterTest.cxx itkDeformableTest.cxx itkGibbsTest.cxx itkMRFImageFilterTest.cxx itkMRIBiasFieldCorrectionFilterTest.cxx itkMattesMutualInformationImageToImageMetricTest.cxx itkMeanReciprocalSquareDifferenceImageMetricTest.cxx itkMeanSquaresHistogramImageToImageMetricTest.cxx itkMeanSquaresImageMetricTest.cxx itkMeanSquaresPointSetToImageMetricTest.cxx itkMinMaxCurvatureFlowImageFilterTest.cxx itkMultiResolutionImageRegistrationMethodTest.cxx itkMultiResolutionImageRegistrationMethodTest_1.cxx itkMultiResolutionImageRegistrationMethodTest_2.cxx itkMultiResolutionPDEDeformableRegistrationTest.cxx itkMultiResolutionPyramidImageFilterTest.cxx itkMutualInformationHistogramImageToImageMetricTest.cxx itkMutualInformationMetricTest.cxx itkNewTest.cxx itkNormalizedCorrelationImageMetricTest.cxx itkNormalizedCorrelationPointSetToImageMetricTest.cxx itkNormalizedMutualInformationHistogramImageToImageMetricTest.cxx itkOrthogonalSwath2DPathFilterTest.cxx itkOtsuThresholdImageCalculatorTest.cxx itkOtsuThresholdImageFilterTest.cxx itkPointSetToImageRegistrationTest_1.cxx itkRecursiveMultiResolutionPyramidImageFilterTest.cxx itkRegionGrow2DTest.cxx itkReinitializeLevelSetImageFilterTest.cxx itkShapeDetectionLevelSetImageFilterTest.cxx itkShapePriorMAPCostFunctionTest.cxx itkShapePriorSegmentationLevelSetFunctionTest.cxx itkSpatialObjectToImageRegistrationTest.cxx itkSphereMeshSourceTest.cxx itkSupervisedImageClassifierTest.cxx itkUnsharpMaskLevelSetImageFilterTest.cxx ) IF(USE_FFTWD) SET(CURVATUREREGISTRATION_SRCS itkCurvatureRegistrationFilterTest.cxx) ENDIF(USE_FFTWD) SET(AlgorithmsTest4_SRCS itkFastMarchingUpwindGradientTest.cxx itkCollidingFrontsImageFilterTest.cxx itkCurvesLevelSetImageFilterZeroSigmaTest.cxx itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest.cxx itkLabelVotingImageFilterTest.cxx itkNarrowBandCurvesLevelSetImageFilterTest.cxx itkFFTTest.cxx ${CURVATUREREGISTRATION_SRCS} itkWatershedImageFilterTest.cxx itkVoronoiPartitioningImageFilterTest.cxx itkVectorThresholdSegmentationLevelSetImageFilterTest.cxx itkMeanReciprocalSquareDifferencePointSetToImageMetricTest.cxx itkThresholdMaximumConnectedComponentsImageFilterTest.cxx ) ADD_EXECUTABLE(itkAlgorithmsPrintTest itkAlgorithmsPrintTest.cxx) TARGET_LINK_LIBRARIES(itkAlgorithmsPrintTest ITKAlgorithms ITKFEM ITKNumerics) ADD_EXECUTABLE(itkAlgorithmsPrintTest2 itkAlgorithmsPrintTest2.cxx) TARGET_LINK_LIBRARIES(itkAlgorithmsPrintTest2 ITKAlgorithms ITKFEM ITKNumerics) # Avoid bogus uninitialied warning in itkWatershedSegementTreeGenerator # by Sun compilers INCLUDE(${ITK_SOURCE_DIR}/CMake/itkCheckCXXAcceptsFlags.cmake) itkCHECK_CXX_ACCEPTS_FLAGS("-features=no%anachronisms" SUN_COMPILER) IF(SUN_COMPILER) SET_SOURCE_FILES_PROPERTIES(itkAlgorithmsPrintTest3.cxx PROPERTIES COMPILE_FLAGS -w) ENDIF(SUN_COMPILER) ADD_EXECUTABLE(itkAlgorithmsPrintTest3 itkAlgorithmsPrintTest3.cxx) TARGET_LINK_LIBRARIES(itkAlgorithmsPrintTest3 ITKAlgorithms ITKFEM ITKNumerics) ADD_EXECUTABLE(itkAlgorithmsPrintTest4 itkAlgorithmsPrintTest4.cxx) TARGET_LINK_LIBRARIES(itkAlgorithmsPrintTest4 ITKAlgorithms ITKFEM ITKStatistics ITKNumerics) IF(ITK_OBJCXX_COMPILER_WORKS) SET(ALGORITHMS_OBJCXX_TEST ${CXX_TEST_PATH}/itkAlgorithmsHeaderObjCxxTest) ADD_TEST(itkAlgorithmsHeaderObjCxxTest ${ALGORITHMS_OBJCXX_TEST}) ADD_EXECUTABLE(itkAlgorithmsHeaderObjCxxTest itkAlgorithmsHeaderObjCxxTest.mm) TARGET_LINK_LIBRARIES(itkAlgorithmsHeaderObjCxxTest ITKAlgorithms ITKFEM ITKNumerics) ENDIF(ITK_OBJCXX_COMPILER_WORKS) ADD_EXECUTABLE(itkAlgorithmsHeaderTest itkAlgorithmsHeaderTest.cxx) TARGET_LINK_LIBRARIES(itkAlgorithmsHeaderTest ITKAlgorithms ITKFEM ITKNumerics) ADD_TEST(itkAlgorithmsHeaderTest ${ALGORITHMS_HEADER_TESTS}) ADD_EXECUTABLE(itkAlgorithmsTests itkAlgorithmsTests.cxx ${AlgorithmsTest_SRCS}) TARGET_LINK_LIBRARIES(itkAlgorithmsTests ITKAlgorithms ITKFEM ITKStatistics ITKNumerics) ADD_EXECUTABLE(itkAlgorithmsTests2 itkAlgorithmsTests2.cxx ${AlgorithmsTest2_SRCS}) TARGET_LINK_LIBRARIES(itkAlgorithmsTests2 ITKAlgorithms ITKFEM ITKStatistics ITKNumerics) ADD_EXECUTABLE(itkAlgorithmsTests3 itkAlgorithmsTests3.cxx ${AlgorithmsTest3_SRCS}) TARGET_LINK_LIBRARIES(itkAlgorithmsTests3 ITKAlgorithms ITKFEM ITKStatistics ITKNumerics) ADD_EXECUTABLE(itkAlgorithmsTests4 itkAlgorithmsTests4.cxx ${AlgorithmsTest4_SRCS}) TARGET_LINK_LIBRARIES(itkAlgorithmsTests4 ITKAlgorithms ITKFEM ITKStatistics ITKNumerics) IF(ITK_DATA_ROOT) ADD_TEST(itkMatchCardinalityImageToImageMetricTest ${ALGORITHMS_TESTS2} itkMatchCardinalityImageToImageMetricTest ${ITK_DATA_ROOT}/Input/Spots.png) ADD_TEST(itkKappaStatisticImageToImageMetricTest ${ALGORITHMS_TESTS2} itkKappaStatisticImageToImageMetricTest ${ITK_DATA_ROOT}/Input/Spots.png) ADD_TEST(itkIsolatedWatershedImageFilterTest ${ALGORITHMS_TESTS2} --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/IsolatedWatershedImageFilterTest.png ${ITK_TEST_OUTPUT_DIR}/IsolatedWatershedImageFilterTest.png itkIsolatedWatershedImageFilterTest ${ITK_DATA_ROOT}/Input/cthead1.png ${ITK_TEST_OUTPUT_DIR}/IsolatedWatershedImageFilterTest.png 113 84 120 99) ADD_TEST(itkOtsuThresholdImageFilterTest ${ALGORITHMS_TESTS3} --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/OtsuThresholdImageFilterTest.png ${ITK_TEST_OUTPUT_DIR}/OtsuThresholdImageFilterTest.png itkOtsuThresholdImageFilterTest ${ITK_DATA_ROOT}/Input/cthead1.png ${ITK_TEST_OUTPUT_DIR}/OtsuThresholdImageFilterTest.png 64) ADD_TEST(itkOtsuMultipleThresholdsImageFilterTest ${ALGORITHMS_TESTS2} --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/OtsuMultipleThresholdsImageFilterTest.png ${ITK_TEST_OUTPUT_DIR}/OtsuMultipleThresholdsImageFilterTest.png itkOtsuMultipleThresholdsImageFilterTest ${ITK_DATA_ROOT}/Input/peppers.png ${ITK_TEST_OUTPUT_DIR}/OtsuMultipleThresholdsImageFilterTest.png 64 3 2) ADD_TEST(itkVoronoiPartitioningImageFilterTest1 ${ALGORITHMS_TESTS4} --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.png ${ITK_TEST_OUTPUT_DIR}/VoronoiPartioningImageFilterTest1.png itkVoronoiPartitioningImageFilterTest ${ITK_DATA_ROOT}/Input/sf4.png ${ITK_TEST_OUTPUT_DIR}/VoronoiPartioningImageFilterTest1.png 1) ADD_TEST(itkVoronoiPartitioningImageFilterTest2 ${ALGORITHMS_TESTS4} --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/VoronoiPartioningImageFilterTest2.png ${ITK_TEST_OUTPUT_DIR}/VoronoiPartioningImageFilterTest2.png itkVoronoiPartitioningImageFilterTest ${ITK_DATA_ROOT}/Input/sf4.png ${ITK_TEST_OUTPUT_DIR}/VoronoiPartioningImageFilterTest2.png 0) ADD_TEST(itkVectorThresholdSegmentationLevelSetImageFilterTest ${ALGORITHMS_TESTS4} --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.png ${ITK_TEST_OUTPUT_DIR}/VectorThresholdSegmentationLevelSetImageFilterTest.png itkVectorThresholdSegmentationLevelSetImageFilterTest ${ITK_DATA_ROOT}/Input/VisibleWomanEyeSliceInitialLevelSet.png ${ITK_DATA_ROOT}/Input/VisibleWomanEyeSlice.png ${ITK_TEST_OUTPUT_DIR}/VectorThresholdSegmentationLevelSetImageFilterTest.png 5.0 50 ) ADD_TEST(itkSTAPLEImageFilterTest ${ALGORITHMS_TESTS2} --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/STAPLEImageFilterTest.mha ${ITK_TEST_OUTPUT_DIR}/STAPLEImageFilterTest.mha itkSTAPLEImageFilterTest 2 ${ITK_TEST_OUTPUT_DIR}/STAPLEImageFilterTest.mha 255 0.5 ${ITK_DATA_ROOT}/Input/STAPLE1.png ${ITK_DATA_ROOT}/Input/STAPLE2.png ${ITK_DATA_ROOT}/Input/STAPLE3.png ${ITK_DATA_ROOT}/Input/STAPLE4.png ) ENDIF(ITK_DATA_ROOT) ENDIF( NOT ITK_DISABLE_CXX_TESTING ) IF( NOT ITK_DISABLE_TCL_TESTING ) IF(ITK_CSWIG_TCL) ADD_TEST(itkCurvatureFlowTestTcl2 ${ITKWISH_EXECUTABLE} ${ITKTesting_SOURCE_DIR}/Code/Algorithms/itkCurvatureFlowTestTcl2.tcl) ADD_TEST(ImageRegistration3Tcl ${ITKWISH_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration3.tcl ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png ${ITK_TEST_OUTPUT_DIR}/ImageRegistration3TclTest.png ) ADD_TEST(ImageRegistration4Tcl ${ITKWISH_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration4.tcl ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png ${ITK_TEST_OUTPUT_DIR}/ImageRegistration4TclTest.png ) ADD_TEST(ImageRegistration5Tcl ${ITKWISH_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration5.tcl ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png ${ITK_TEST_OUTPUT_DIR}/ImageRegistration5TclTest.png ) ADD_TEST(VoronoiSegmentationTcl ${ITKWISH_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Segmentation/VoronoiSegmentation.tcl ${ITK_SOURCE_DIR}/Examples/Data/BrainT1Slice.png ${ITK_SOURCE_DIR}/Examples/Data/VentricleModel.png ${ITK_TEST_OUTPUT_DIR}/VoronoiSegmentationTcl.png 0.3 0.3 ) ADD_TEST(WatershedSegmentation1Tcl ${ITKWISH_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Segmentation/WatershedSegmentation1.tcl ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySlice.png ${ITK_TEST_OUTPUT_DIR}/WatershedSegmentation1Tcl.mhd ) ENDIF(ITK_CSWIG_TCL) ENDIF( NOT ITK_DISABLE_TCL_TESTING ) IF( NOT ITK_DISABLE_PYTHON_TESTING ) IF(ITK_CSWIG_PYTHON) ADD_TEST(itkCurvatureFlowTestPython2 ${PYTHON_EXECUTABLE} ${ITKTesting_SOURCE_DIR}/Code/Algorithms/itkCurvatureFlowTestPython2.py) ADD_TEST(ImageRegistration3Python ${PYTHON_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration3.py ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png ${ITK_TEST_OUTPUT_DIR}/ImageRegistration3PythonTest.png ) ADD_TEST(ImageRegistration4Python ${PYTHON_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration4.py ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png ${ITK_TEST_OUTPUT_DIR}/ImageRegistration4PythonTest.png ) ADD_TEST(ImageRegistration5Python ${PYTHON_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration5.py ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png ${ITK_TEST_OUTPUT_DIR}/ImageRegistration5PythonTest.png ) ADD_TEST(VoronoiSegmentationPython ${PYTHON_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Segmentation/VoronoiSegmentation.py ${ITK_SOURCE_DIR}/Examples/Data/BrainT1Slice.png ${ITK_SOURCE_DIR}/Examples/Data/VentricleModel.png ${ITK_TEST_OUTPUT_DIR}/VoronoiSegmentationPython.png 0.3 0.3 ) ADD_TEST(WatershedSegmentation1Python ${PYTHON_EXECUTABLE} ${ITK_SOURCE_DIR}/Examples/Segmentation/WatershedSegmentation1.py ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySlice.png ${ITK_TEST_OUTPUT_DIR}/WatershedSegmentation1Python.mhd ) ENDIF(ITK_CSWIG_PYTHON) ENDIF( NOT ITK_DISABLE_PYTHON_TESTING ) IF( NOT ITK_DISABLE_JAVA_TESTING ) IF(ITK_CSWIG_JAVA AND ITK_BINARY_DIR) SET(JAVACLASSPATH ${ITK_BINARY_DIR}/Wrapping/CSwig/Java/InsightToolkit.jar) FOREACH(cfgtype ${CMAKE_CONFIGURATION_TYPES}) SET(JAVACLASSPATH "${JAVACLASSPATH}\\;${ITK_BINARY_DIR}/Wrapping/CSwig/Java/${cfgtype}/InsightToolkit.jar") ENDFOREACH(cfgtype) FOREACH( javatestfile VoronoiSegmentation WatershedSegmentation1 ) ADD_CUSTOM_TARGET(${javatestfile}Java ALL DEPENDS ${ITK_BINARY_DIR}/Examples/Segmentation/${javatestfile}.class) ADD_CUSTOM_COMMAND( OUTPUT ${ITK_BINARY_DIR}/Examples/Segmentation/${javatestfile}.class DEPENDS ${ITK_SOURCE_DIR}/Examples/Segmentation/${javatestfile}.java COMMAND ${JAVA_COMPILE} ARGS -classpath "${JAVACLASSPATH}" -d "${ITK_BINARY_DIR}/Examples/Segmentation" ${ITK_SOURCE_DIR}/Examples/Segmentation/${javatestfile}.java COMMENT "Java Class") ENDFOREACH( javatestfile ) IF(WIN32) SET(TMPJAVACLASSPATH ${ITK_BINARY_DIR}/Examples/Segmentation/) FOREACH(javadirectory ${JAVACLASSPATH}) # Set path separator for Windows SET(TMPJAVACLASSPATH "${TMPJAVACLASSPATH}\\;${javadirectory}") ENDFOREACH(javadirectory) SET(JAVACLASSPATH ${TMPJAVACLASSPATH}) ELSE(WIN32) SET(TMPJAVACLASSPATH ${ITK_BINARY_DIR}/Examples/Segmentation/) FOREACH(javadirectory ${JAVACLASSPATH}) # Set path separator for UNIX SET(TMPJAVACLASSPATH "${TMPJAVACLASSPATH}:${javadirectory}") ENDFOREACH(javadirectory) SET(JAVACLASSPATH ${TMPJAVACLASSPATH}) ENDIF(WIN32) ADD_TEST(VoronoiSegmentationJava ${JAVA_RUNTIME} -classpath "${JAVACLASSPATH}" VoronoiSegmentation ${ITK_SOURCE_DIR}/Examples/Data/BrainT1Slice.png ${ITK_SOURCE_DIR}/Examples/Data/VentricleModel.png ${ITK_TEST_OUTPUT_DIR}/VoronoiSegmentationJava.png 0.3 0.3 ) ADD_TEST(WatershedSegmentation1Java ${JAVA_RUNTIME} -classpath "${JAVACLASSPATH}" WatershedSegmentation1 ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySlice.png ${ITK_TEST_OUTPUT_DIR}/WatershedSegmentation1Java.mhd ) ENDIF(ITK_CSWIG_JAVA AND ITK_BINARY_DIR) ENDIF( NOT ITK_DISABLE_JAVA_TESTING )