# GeneControl configuration example # this config file is loaded by default # fit it to your needs or indicate/load a different config file per command-line execution resp. in the graphical user interface. # indicate needed files # 1. Gene Annotations # 2. Amino Acid Sequences # 3. Path for the output files (optional) # 4. Path to reference chromosomes FgeneAnnoFile = M:/Downloads/Data/human/knownGene.txt FgeneAaSeqFile = M:/Downloads/Data/human/knownGenePep.txt FoutputPath = M:/Downloads/Data/human/ refSeqPath = M:/Downloads/Data/human/ # define the desired minimum similarity between reference amino acid sequences and self translated sequences # comparisons of sequences with different lengths will result in a similarity of zero minSimilarity = 0.95