Description: fix privacy-breach-generic in cookbookpage.html
 The document refers to a diagram hosted on github, but there is a local copy
 readily available for use, so lets use this one.
 .
 The file layout is somewhat odd, so I refrained to forward upstream.
Author: Étienne Mollier <emollier@debian.org>
Forwarded: not-needed
Last-Update: 2021-09-16
---
This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
--- ivar.orig/docs/html/cookbookpage.html
+++ ivar/docs/html/cookbookpage.html
@@ -73,7 +73,7 @@
 <p>The two pipelines are distributed along with iVar and are present in the<a href="https://github.com/andersen-lab/ivar/tree/master/pipeline">pipeline/</a> and <a href="https://github.com/andersen-lab/ivar/tree/master/pipeline_field">pipeline_field/</a> fodlers respectively.</p>
 <p>For both pipelines, there are four parameters that will have to be set in beginning of the Snakefile.</p>
 <div class="fragment"><div class="line">in_dir = &quot;&lt;input fastq files&gt;&quot;</div><div class="line">out_dir = &quot;&lt;output directory&gt;&quot;</div><div class="line">bed = &quot;&lt;bed-file-with-primer-positions&gt;&quot;</div><div class="line">ref=&quot;&lt;path to reference fasta&gt;&quot;</div></div><!-- fragment --><div class="image">
-<img src="https://raw.githubusercontent.com/andersen-lab/ivar/master/pipeline/pipeline.png" width="500"/>
+<img src="./pipeline.png/pipeline.png" width="500"/>
 </div>
 <h3>Call iSNVs from samples with known reference sequence</h3>
 <p><a href="https://github.com/andersen-lab/paper_2018_primalseq-ivar/blob/master/cookbook/CookBook.ipynb">Link to Jupyter Notebook</a></p>