From: Sascha Steinbiss Date: Sun, 9 Oct 2016 15:06:20 +0000 Subject: enforce linking of -lrt -lpthread This patch makes sure that these get linked even though they might be missing in $SEQAN_LIBRARIES (until this is fixed in libseqan2-dev). --- src/CMakeLists.txt | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt index da7ff38..9fc2e08 100644 --- a/src/CMakeLists.txt +++ b/src/CMakeLists.txt @@ -208,8 +208,8 @@ add_executable (lambda_indexer lambda_indexer.cpp radix_inplace.h) # Add dependencies found by find_package (SeqAn). -target_link_libraries (lambda ${SEQAN_LIBRARIES}) -target_link_libraries (lambda_indexer ${SEQAN_LIBRARIES}) +target_link_libraries (lambda ${SEQAN_LIBRARIES} rt pthread) +target_link_libraries (lambda_indexer ${SEQAN_LIBRARIES} rt pthread) # Add CXX flags found by find_package (SeqAn). set (CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${SEQAN_CXX_FLAGS}")