Index of /data/main/l/lammps/20220106.git7586adbb6a+ds1-2/doc/src
Parent Directory
99/
2001/
Bibliography.rst
Build.rst
Build_basics.rst
Build_cmake.rst
Build_development.rst
Build_diskspace.rst
Build_extras.rst
Build_link.rst
Build_make.rst
Build_manual.rst
Build_package.rst
Build_settings.rst
Build_windows.rst
Classes.rst
Classes_atom.rst
Classes_input.rst
Classes_lammps.rst
Commands.rst
Commands_all.rst
Commands_bond.rst
Commands_category.rst
Commands_compute.rst
Commands_fix.rst
Commands_input.rst
Commands_kspace.rst
Commands_pair.rst
Commands_parse.rst
Commands_removed.rst
Commands_structure.rst
Cplusplus.rst
Developer.rst
Developer_flow.rst
Developer_notes.rst
Developer_org.rst
Developer_par_comm.rst
Developer_par_long.rst
Developer_par_neigh.rst
Developer_par_openmp.rst
Developer_par_part.rst
Developer_parallel.rst
Developer_plugins.rst
Developer_unittest.rst
Developer_utils.rst
Developer_write.rst
Errors.rst
Errors_bugs.rst
Errors_common.rst
Errors_debug.rst
Errors_messages.rst
Errors_warnings.rst
Examples.rst
Fortran.rst
Howto.rst
Howto_2d.rst
Howto_barostat.rst
Howto_bioFF.rst
Howto_body.rst
Howto_chunk.rst
Howto_client_server.rst
Howto_cmake.rst
Howto_coreshell.rst
Howto_couple.rst
Howto_diffusion.rst
Howto_dispersion.rst
Howto_drude.rst
Howto_drude2.rst
Howto_elastic.rst
Howto_github.rst
Howto_granular.rst
Howto_kappa.rst
Howto_library.rst
Howto_manifold.rst
Howto_mdi.rst
Howto_multiple.rst
Howto_nemd.rst
Howto_output.rst
Howto_polarizable.rst
Howto_pylammps.rst
Howto_replica.rst
Howto_restart.rst
Howto_spc.rst
Howto_spherical.rst
Howto_spins.rst
Howto_structured_data.rst
Howto_temperature.rst
Howto_thermostat.rst
Howto_tip3p.rst
Howto_tip4p.rst
Howto_triclinic.rst
Howto_viscosity.rst
Howto_viz.rst
Howto_walls.rst
Howto_wsl.rst
Install.rst
Install_conda.rst
Install_git.rst
Install_linux.rst
Install_mac.rst
Install_tarball.rst
Install_windows.rst
Intro.rst
Intro_authors.rst
Intro_citing.rst
Intro_features.rst
Intro_nonfeatures.rst
Intro_opensource.rst
Intro_overview.rst
Intro_website.rst
JPG/
Library.rst
Library_add.rst
Library_atoms.rst
Library_config.rst
Library_create.rst
Library_execute.rst
Library_neighbor.rst
Library_objects.rst
Library_properties.rst
Library_scatter.rst
Library_utility.rst
Manual.rst
Manual_version.rst
Modify.rst
Modify_atom.rst
Modify_body.rst
Modify_bond.rst
Modify_command.rst
Modify_compute.rst
Modify_contribute.rst
Modify_dump.rst
Modify_fix.rst
Modify_kspace.rst
Modify_min.rst
Modify_overview.rst
Modify_pair.rst
Modify_region.rst
Modify_style.rst
Modify_thermo.rst
Modify_variable.rst
PDF/
Packages.rst
Packages_details.rst
Packages_list.rst
Python_atoms.rst
Python_call.rst
Python_config.rst
Python_create.rst
Python_error.rst
Python_examples.rst
Python_execute.rst
Python_ext.rst
Python_formats.rst
Python_head.rst
Python_install.rst
Python_launch.rst
Python_module.rst
Python_neighbor.rst
Python_objects.rst
Python_overview.rst
Python_properties.rst
Python_run.rst
Python_scatter.rst
Python_trouble.rst
Run_basics.rst
Run_head.rst
Run_options.rst
Run_output.rst
Run_windows.rst
Speed.rst
Speed_bench.rst
Speed_compare.rst
Speed_gpu.rst
Speed_intel.rst
Speed_kokkos.rst
Speed_measure.rst
Speed_omp.rst
Speed_opt.rst
Speed_packages.rst
Speed_tips.rst
Tools.rst
_ext/
accel_styles.rst
angle_charmm.rst
angle_class2.rst
angle_coeff.rst
angle_cosine.rst
angle_cosine_buck6d.rst
angle_cosine_delta.rst
angle_cosine_periodic.rst
angle_cosine_shift.rst
angle_cosine_shift_exp.rst
angle_cosine_squared.rst
angle_cross.rst
angle_dipole.rst
angle_fourier.rst
angle_fourier_simple.rst
angle_gaussian.rst
angle_harmonic.rst
angle_hybrid.rst
angle_mm3.rst
angle_none.rst
angle_quartic.rst
angle_sdk.rst
angle_style.rst
angle_table.rst
angle_zero.rst
angles.rst
atc_add_molecule.rst
atc_add_species.rst
atc_atom_element_map.rst
atc_atom_weight.rst
atc_atomic_charge.rst
atc_boundary_dynamics.rst
atc_boundary_faceset.rst
atc_boundary_type.rst
atc_consistent_fe_initialization.rst
atc_control_localized_lambda.rst
atc_control_momentum.rst
atc_control_thermal.rst
atc_decomposition.rst
atc_electron_integration.rst
atc_equilibrium_start.rst
atc_extrinsic_exchange.rst
atc_fe_md_boundary.rst
atc_filter_scale.rst
atc_filter_type.rst
atc_fix.rst
atc_fix_flux.rst
atc_hardy_computes.rst
atc_hardy_fields.rst
atc_hardy_gradients.rst
atc_hardy_kernel.rst
atc_hardy_on_the_fly.rst
atc_hardy_rates.rst
atc_initial.rst
atc_internal_element_set.rst
atc_internal_quadrature.rst
atc_kernel_bandwidth.rst
atc_lumped_lambda_solve.rst
atc_mask_direction.rst
atc_mass_matrix.rst
atc_material.rst
atc_mesh_add_to_nodeset.rst
atc_mesh_create.rst
atc_mesh_create_elementset.rst
atc_mesh_create_faceset_box.rst
atc_mesh_create_faceset_plane.rst
atc_mesh_create_nodeset.rst
atc_mesh_delete_elements.rst
atc_mesh_nodeset_to_elementset.rst
atc_mesh_output.rst
atc_mesh_quadrature.rst
atc_mesh_read.rst
atc_mesh_write.rst
atc_output.rst
atc_output_boundary_integral.rst
atc_output_contour_integral.rst
atc_output_nodeset.rst
atc_output_volume_integral.rst
atc_pair_interactions.rst
atc_poisson_solver.rst
atc_read_restart.rst
atc_remove_molecule.rst
atc_remove_source.rst
atc_remove_species.rst
atc_reset_atomic_reference.rst
atc_reset_time.rst
atc_sample_frequency.rst
atc_set_reference_pe.rst
atc_source.rst
atc_source_integration.rst
atc_temperature_definition.rst
atc_time_filter.rst
atc_time_integration.rst
atc_track_displacement.rst
atc_unfix.rst
atc_unfix_flux.rst
atc_write_atom_weights.rst
atc_write_restart.rst
atom_modify.rst
atom_style.rst
balance.rst
bond_class2.rst
bond_coeff.rst
bond_fene.rst
bond_fene_expand.rst
bond_gaussian.rst
bond_gromos.rst
bond_harmonic.rst
bond_harmonic_shift.rst
bond_harmonic_shift_cut.rst
bond_hybrid.rst
bond_mm3.rst
bond_morse.rst
bond_none.rst
bond_nonlinear.rst
bond_oxdna.rst
bond_quartic.rst
bond_special.rst
bond_style.rst
bond_table.rst
bond_write.rst
bond_zero.rst
bonds.rst
boundary.rst
box.rst
change_box.rst
clear.rst
comm_modify.rst
comm_style.rst
commands_list.rst
compute.rst
compute_ackland_atom.rst
compute_adf.rst
compute_angle.rst
compute_angle_local.rst
compute_angmom_chunk.rst
compute_basal_atom.rst
compute_body_local.rst
compute_bond.rst
compute_bond_local.rst
compute_centro_atom.rst
compute_chunk_atom.rst
compute_chunk_spread_atom.rst
compute_cluster_atom.rst
compute_cna_atom.rst
compute_cnp_atom.rst
compute_com.rst
compute_com_chunk.rst
compute_contact_atom.rst
compute_coord_atom.rst
compute_damage_atom.rst
compute_dihedral.rst
compute_dihedral_local.rst
compute_dilatation_atom.rst
compute_dipole.rst
compute_dipole_chunk.rst
compute_displace_atom.rst
compute_dpd.rst
compute_dpd_atom.rst
compute_edpd_temp_atom.rst
compute_efield_atom.rst
compute_entropy_atom.rst
compute_erotate_asphere.rst
compute_erotate_rigid.rst
compute_erotate_sphere.rst
compute_erotate_sphere_atom.rst
compute_event_displace.rst
compute_fabric.rst
compute_fep.rst
compute_global_atom.rst
compute_group_group.rst
compute_gyration.rst
compute_gyration_chunk.rst
compute_gyration_shape.rst
compute_gyration_shape_chunk.rst
compute_heat_flux.rst
compute_hexorder_atom.rst
compute_hma.rst
compute_improper.rst
compute_improper_local.rst
compute_inertia_chunk.rst
compute_ke.rst
compute_ke_atom.rst
compute_ke_atom_eff.rst
compute_ke_eff.rst
compute_ke_rigid.rst
compute_mesont.rst
compute_mliap.rst
compute_modify.rst
compute_momentum.rst
compute_msd.rst
compute_msd_chunk.rst
compute_msd_nongauss.rst
compute_omega_chunk.rst
compute_orientorder_atom.rst
compute_pair.rst
compute_pair_local.rst
compute_pe.rst
compute_pe_atom.rst
compute_plasticity_atom.rst
compute_pressure.rst
compute_pressure_cylinder.rst
compute_pressure_uef.rst
compute_property_atom.rst
compute_property_chunk.rst
compute_property_local.rst
compute_ptm_atom.rst
compute_rdf.rst
compute_reduce.rst
compute_reduce_chunk.rst
compute_rigid_local.rst
compute_saed.rst
compute_slice.rst
compute_smd_contact_radius.rst
compute_smd_damage.rst
compute_smd_hourglass_error.rst
compute_smd_internal_energy.rst
compute_smd_plastic_strain.rst
compute_smd_plastic_strain_rate.rst
compute_smd_rho.rst
compute_smd_tlsph_defgrad.rst
compute_smd_tlsph_dt.rst
compute_smd_tlsph_num_neighs.rst
compute_smd_tlsph_shape.rst
compute_smd_tlsph_strain.rst
compute_smd_tlsph_strain_rate.rst
compute_smd_tlsph_stress.rst
compute_smd_triangle_vertices.rst
compute_smd_ulsph_effm.rst
compute_smd_ulsph_num_neighs.rst
compute_smd_ulsph_strain.rst
compute_smd_ulsph_strain_rate.rst
compute_smd_ulsph_stress.rst
compute_smd_vol.rst
compute_sna_atom.rst
compute_sph_e_atom.rst
compute_sph_rho_atom.rst
compute_sph_t_atom.rst
compute_spin.rst
compute_stress_atom.rst
compute_stress_mop.rst
compute_tally.rst
compute_tdpd_cc_atom.rst
compute_temp.rst
compute_temp_asphere.rst
compute_temp_body.rst
compute_temp_chunk.rst
compute_temp_com.rst
compute_temp_cs.rst
compute_temp_deform.rst
compute_temp_deform_eff.rst
compute_temp_drude.rst
compute_temp_eff.rst
compute_temp_partial.rst
compute_temp_profile.rst
compute_temp_ramp.rst
compute_temp_region.rst
compute_temp_region_eff.rst
compute_temp_rotate.rst
compute_temp_sphere.rst
compute_temp_uef.rst
compute_ti.rst
compute_torque_chunk.rst
compute_vacf.rst
compute_vcm_chunk.rst
compute_viscosity_cos.rst
compute_voronoi_atom.rst
compute_xrd.rst
computes.rst
create_atoms.rst
create_bonds.rst
create_box.rst
delete_atoms.rst
delete_bonds.rst
dielectric.rst
dihedral_charmm.rst
dihedral_class2.rst
dihedral_coeff.rst
dihedral_cosine_shift_exp.rst
dihedral_fourier.rst
dihedral_harmonic.rst
dihedral_helix.rst
dihedral_hybrid.rst
dihedral_multi_harmonic.rst
dihedral_nharmonic.rst
dihedral_none.rst
dihedral_opls.rst
dihedral_quadratic.rst
dihedral_spherical.rst
dihedral_style.rst
dihedral_table.rst
dihedral_zero.rst
dihedrals.rst
dimension.rst
displace_atoms.rst
dump.rst
dump_adios.rst
dump_cfg_uef.rst
dump_h5md.rst
dump_image.rst
dump_modify.rst
dump_molfile.rst
dump_netcdf.rst
dump_vtk.rst
dynamical_matrix.rst
echo.rst
fix.rst
fix_accelerate_cos.rst
fix_adapt.rst
fix_adapt_fep.rst
fix_addforce.rst
fix_addtorque.rst
fix_append_atoms.rst
fix_atc.rst
fix_atom_swap.rst
fix_ave_atom.rst
fix_ave_chunk.rst
fix_ave_correlate.rst
fix_ave_correlate_long.rst
fix_ave_histo.rst
fix_ave_time.rst
fix_aveforce.rst
fix_balance.rst
fix_bocs.rst
fix_bond_break.rst
fix_bond_create.rst
fix_bond_react.rst
fix_bond_swap.rst
fix_box_relax.rst
fix_brownian.rst
fix_charge_regulation.rst
fix_client_md.rst
fix_cmap.rst
fix_colvars.rst
fix_controller.rst
fix_deform.rst
fix_deposit.rst
fix_dpd_energy.rst
fix_dpd_source.rst
fix_drag.rst
fix_drude.rst
fix_drude_transform.rst
fix_dt_reset.rst
fix_efield.rst
fix_ehex.rst
fix_electron_stopping.rst
fix_enforce2d.rst
fix_eos_cv.rst
fix_eos_table.rst
fix_eos_table_rx.rst
fix_evaporate.rst
fix_external.rst
fix_ffl.rst
fix_filter_corotate.rst
fix_flow_gauss.rst
fix_freeze.rst
fix_gcmc.rst
fix_gld.rst
fix_gle.rst
fix_gravity.rst
fix_grem.rst
fix_halt.rst
fix_heat.rst
fix_hyper_global.rst
fix_hyper_local.rst
fix_imd.rst
fix_indent.rst
fix_ipi.rst
fix_langevin.rst
fix_langevin_drude.rst
fix_langevin_eff.rst
fix_langevin_spin.rst
fix_latte.rst
fix_lb_fluid.rst
fix_lb_momentum.rst
fix_lb_pc.rst
fix_lb_rigid_pc_sphere.rst
fix_lb_viscous.rst
fix_lineforce.rst
fix_manifoldforce.rst
fix_mdi_engine.rst
fix_meso_move.rst
fix_modify.rst
fix_modify_atc_commands.rst
fix_momentum.rst
fix_move.rst
fix_mscg.rst
fix_msst.rst
fix_mvv_dpd.rst
fix_neb.rst
fix_neb_spin.rst
fix_nh.rst
fix_nh_eff.rst
fix_nh_uef.rst
fix_nph_asphere.rst
fix_nph_body.rst
fix_nph_sphere.rst
fix_nphug.rst
fix_npt_asphere.rst
fix_npt_body.rst
fix_npt_cauchy.rst
fix_npt_sphere.rst
fix_numdiff.rst
fix_nve.rst
fix_nve_asphere.rst
fix_nve_asphere_noforce.rst
fix_nve_awpmd.rst
fix_nve_body.rst
fix_nve_dot.rst
fix_nve_dotc_langevin.rst
fix_nve_eff.rst
fix_nve_limit.rst
fix_nve_line.rst
fix_nve_manifold_rattle.rst
fix_nve_noforce.rst
fix_nve_sphere.rst
fix_nve_spin.rst
fix_nve_tri.rst
fix_nvk.rst
fix_nvt_asphere.rst
fix_nvt_body.rst
fix_nvt_manifold_rattle.rst
fix_nvt_sllod.rst
fix_nvt_sllod_eff.rst
fix_nvt_sphere.rst
fix_oneway.rst
fix_orient.rst
fix_orient_eco.rst
fix_pafi.rst
fix_pair_tracker.rst
fix_phonon.rst
fix_pimd.rst
fix_planeforce.rst
fix_plumed.rst
fix_poems.rst
fix_polarize.rst
fix_pour.rst
fix_precession_spin.rst
fix_press_berendsen.rst
fix_print.rst
fix_propel_self.rst
fix_property_atom.rst
fix_python_invoke.rst
fix_python_move.rst
fix_qbmsst.rst
fix_qeq.rst
fix_qeq_comb.rst
fix_qeq_reaxff.rst
fix_qmmm.rst
fix_qtb.rst
fix_reaxff_bonds.rst
fix_reaxff_species.rst
fix_recenter.rst
fix_restrain.rst
fix_rhok.rst
fix_rigid.rst
fix_rigid_meso.rst
fix_rx.rst
fix_saed_vtk.rst
fix_setforce.rst
fix_shake.rst
fix_shardlow.rst
fix_smd.rst
fix_smd_adjust_dt.rst
fix_smd_integrate_tlsph.rst
fix_smd_integrate_ulsph.rst
fix_smd_move_triangulated_surface.rst
fix_smd_setvel.rst
fix_smd_wall_surface.rst
fix_sph.rst
fix_sph_stationary.rst
fix_spring.rst
fix_spring_chunk.rst
fix_spring_rg.rst
fix_spring_self.rst
fix_srd.rst
fix_store_force.rst
fix_store_state.rst
fix_temp_berendsen.rst
fix_temp_csvr.rst
fix_temp_rescale.rst
fix_temp_rescale_eff.rst
fix_tfmc.rst
fix_tgnh_drude.rst
fix_thermal_conductivity.rst
fix_ti_spring.rst
fix_tmd.rst
fix_ttm.rst
fix_tune_kspace.rst
fix_vector.rst
fix_viscosity.rst
fix_viscous.rst
fix_wall.rst
fix_wall_body_polygon.rst
fix_wall_body_polyhedron.rst
fix_wall_ees.rst
fix_wall_gran.rst
fix_wall_gran_region.rst
fix_wall_piston.rst
fix_wall_reflect.rst
fix_wall_reflect_stochastic.rst
fix_wall_region.rst
fix_wall_srd.rst
fix_widom.rst
fixes.rst
group.rst
group2ndx.rst
hyper.rst
if.rst
img/
improper_class2.rst
improper_coeff.rst
improper_cossq.rst
improper_cvff.rst
improper_distance.rst
improper_distharm.rst
improper_fourier.rst
improper_harmonic.rst
improper_hybrid.rst
improper_inversion_harmonic.rst
improper_none.rst
improper_ring.rst
improper_sqdistharm.rst
improper_style.rst
improper_umbrella.rst
improper_zero.rst
impropers.rst
include.rst
info.rst
jump.rst
kim_commands.rst
kspace_modify.rst
kspace_style.rst
label.rst
lattice.rst
log.rst
mass.rst
mdi_engine.rst
message.rst
min_modify.rst
min_spin.rst
min_style.rst
minimize.rst
molecule.rst
neb.rst
neb_spin.rst
neigh_modify.rst
neighbor.rst
newton.rst
next.rst
package.rst
pair_adp.rst
pair_agni.rst
pair_airebo.rst
pair_atm.rst
pair_awpmd.rst
pair_beck.rst
pair_body_nparticle.rst
pair_body_rounded_polygon.rst
pair_body_rounded_polyhedron.rst
pair_bop.rst
pair_born.rst
pair_brownian.rst
pair_buck.rst
pair_buck6d_coul_gauss.rst
pair_buck_long.rst
pair_charmm.rst
pair_class2.rst
pair_coeff.rst
pair_colloid.rst
pair_comb.rst
pair_cosine_squared.rst
pair_coul.rst
pair_coul_diel.rst
pair_coul_shield.rst
pair_coul_slater.rst
pair_coul_tt.rst
pair_cs.rst
pair_dielectric.rst
pair_dipole.rst
pair_dpd.rst
pair_dpd_ext.rst
pair_dpd_fdt.rst
pair_drip.rst
pair_dsmc.rst
pair_e3b.rst
pair_eam.rst
pair_edip.rst
pair_eff.rst
pair_eim.rst
pair_exp6_rx.rst
pair_extep.rst
pair_fep_soft.rst
pair_gauss.rst
pair_gayberne.rst
pair_gran.rst
pair_granular.rst
pair_gromacs.rst
pair_gw.rst
pair_hbond_dreiding.rst
pair_hdnnp.rst
pair_hybrid.rst
pair_ilp_graphene_hbn.rst
pair_kim.rst
pair_kolmogorov_crespi_full.rst
pair_kolmogorov_crespi_z.rst
pair_lcbop.rst
pair_lebedeva_z.rst
pair_line_lj.rst
pair_list.rst
pair_lj.rst
pair_lj96.rst
pair_lj_cubic.rst
pair_lj_cut_coul.rst
pair_lj_cut_tip4p.rst
pair_lj_expand.rst
pair_lj_long.rst
pair_lj_relres.rst
pair_lj_smooth.rst
pair_lj_smooth_linear.rst
pair_lj_switch3_coulgauss_long.rst
pair_local_density.rst
pair_lubricate.rst
pair_lubricateU.rst
pair_mdf.rst
pair_meam.rst
pair_meam_spline.rst
pair_meam_sw_spline.rst
pair_mesocnt.rst
pair_mesodpd.rst
pair_mesont_tpm.rst
pair_mgpt.rst
pair_mie.rst
pair_mliap.rst
pair_modify.rst
pair_momb.rst
pair_morse.rst
pair_multi_lucy.rst
pair_multi_lucy_rx.rst
pair_nb3b_harmonic.rst
pair_nm.rst
pair_none.rst
pair_oxdna.rst
pair_oxdna2.rst
pair_oxrna2.rst
pair_pace.rst
pair_peri.rst
pair_polymorphic.rst
pair_python.rst
pair_quip.rst
pair_rann.rst
pair_reaxff.rst
pair_resquared.rst
pair_sdk.rst
pair_sdpd_taitwater_isothermal.rst
pair_smd_hertz.rst
pair_smd_tlsph.rst
pair_smd_triangulated_surface.rst
pair_smd_ulsph.rst
pair_smtbq.rst
pair_snap.rst
pair_soft.rst
pair_sph_heatconduction.rst
pair_sph_idealgas.rst
pair_sph_lj.rst
pair_sph_rhosum.rst
pair_sph_taitwater.rst
pair_sph_taitwater_morris.rst
pair_spin_dipole.rst
pair_spin_dmi.rst
pair_spin_exchange.rst
pair_spin_magelec.rst
pair_spin_neel.rst
pair_srp.rst
pair_style.rst
pair_sw.rst
pair_table.rst
pair_table_rx.rst
pair_tersoff.rst
pair_tersoff_mod.rst
pair_tersoff_zbl.rst
pair_thole.rst
pair_tracker.rst
pair_tri_lj.rst
pair_ufm.rst
pair_vashishta.rst
pair_wf_cut.rst
pair_write.rst
pair_yukawa.rst
pair_yukawa_colloid.rst
pair_zbl.rst
pair_zero.rst
pairs.rst
partition.rst
plugin.rst
prd.rst
print.rst
processors.rst
python.rst
quit.rst
read_data.rst
read_dump.rst
read_restart.rst
region.rst
replicate.rst
rerun.rst
reset_atom_ids.rst
reset_mol_ids.rst
reset_timestep.rst
restart.rst
run.rst
run_style.rst
server.rst
server_mc.rst
server_md.rst
set.rst
shell.rst
special_bonds.rst
suffix.rst
tad.rst
temper.rst
temper_grem.rst
temper_npt.rst
thermo.rst
thermo_modify.rst
thermo_style.rst
third_order.rst
timer.rst
timestep.rst
uncompute.rst
undump.rst
unfix.rst
units.rst
variable.rst
velocity.rst
write_coeff.rst
write_data.rst
write_dump.rst
write_restart.rst
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