package Bio::Chado::Schema::Result::NaturalDiversity::NdExperiment; BEGIN { $Bio::Chado::Schema::Result::NaturalDiversity::NdExperiment::AUTHORITY = 'cpan:RBUELS'; } BEGIN { $Bio::Chado::Schema::Result::NaturalDiversity::NdExperiment::VERSION = '0.10010'; } # Created by DBIx::Class::Schema::Loader # DO NOT MODIFY THE FIRST PART OF THIS FILE use strict; use warnings; use base 'DBIx::Class::Core'; =head1 NAME Bio::Chado::Schema::Result::NaturalDiversity::NdExperiment =cut __PACKAGE__->table("nd_experiment"); =head1 ACCESSORS =head2 nd_experiment_id data_type: 'integer' is_auto_increment: 1 is_nullable: 0 sequence: 'nd_experiment_nd_experiment_id_seq' =head2 nd_geolocation_id data_type: 'integer' is_foreign_key: 1 is_nullable: 0 =head2 type_id data_type: 'integer' is_foreign_key: 1 is_nullable: 0 =cut __PACKAGE__->add_columns( "nd_experiment_id", { data_type => "integer", is_auto_increment => 1, is_nullable => 0, sequence => "nd_experiment_nd_experiment_id_seq", }, "nd_geolocation_id", { data_type => "integer", is_foreign_key => 1, is_nullable => 0 }, "type_id", { data_type => "integer", is_foreign_key => 1, is_nullable => 0 }, ); __PACKAGE__->set_primary_key("nd_experiment_id"); =head1 RELATIONS =head2 nd_geolocation Type: belongs_to Related object: L =cut __PACKAGE__->belongs_to( "nd_geolocation", "Bio::Chado::Schema::Result::NaturalDiversity::NdGeolocation", { nd_geolocation_id => "nd_geolocation_id" }, { cascade_copy => 0, cascade_delete => 0, is_deferrable => 1, on_delete => "CASCADE", on_update => "CASCADE", }, ); =head2 type Type: belongs_to Related object: L =cut __PACKAGE__->belongs_to( "type", "Bio::Chado::Schema::Result::Cv::Cvterm", { cvterm_id => "type_id" }, { cascade_copy => 0, cascade_delete => 0, is_deferrable => 1, on_delete => "CASCADE", on_update => "CASCADE", }, ); =head2 nd_experiment_contacts Type: has_many Related object: L =cut __PACKAGE__->has_many( "nd_experiment_contacts", "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentContact", { "foreign.nd_experiment_id" => "self.nd_experiment_id" }, { cascade_copy => 0, cascade_delete => 0 }, ); =head2 nd_experiment_dbxrefs Type: has_many Related object: L =cut __PACKAGE__->has_many( "nd_experiment_dbxrefs", "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentDbxref", { "foreign.nd_experiment_id" => "self.nd_experiment_id" }, { cascade_copy => 0, cascade_delete => 0 }, ); =head2 nd_experiment_genotypes Type: has_many Related object: L =cut __PACKAGE__->has_many( "nd_experiment_genotypes", "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentGenotype", { "foreign.nd_experiment_id" => "self.nd_experiment_id" }, { cascade_copy => 0, cascade_delete => 0 }, ); =head2 nd_experiment_phenotypes Type: has_many Related object: L =cut __PACKAGE__->has_many( "nd_experiment_phenotypes", "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentPhenotype", { "foreign.nd_experiment_id" => "self.nd_experiment_id" }, { cascade_copy => 0, cascade_delete => 0 }, ); =head2 nd_experiment_projects Type: has_many Related object: L =cut __PACKAGE__->has_many( "nd_experiment_projects", "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentProject", { "foreign.nd_experiment_id" => "self.nd_experiment_id" }, { cascade_copy => 0, cascade_delete => 0 }, ); =head2 nd_experimentprops Type: has_many Related object: L =cut __PACKAGE__->has_many( "nd_experimentprops", "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentprop", { "foreign.nd_experiment_id" => "self.nd_experiment_id" }, { cascade_copy => 0, cascade_delete => 0 }, ); =head2 nd_experiment_protocols Type: has_many Related object: L =cut __PACKAGE__->has_many( "nd_experiment_protocols", "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentProtocol", { "foreign.nd_experiment_id" => "self.nd_experiment_id" }, { cascade_copy => 0, cascade_delete => 0 }, ); =head2 nd_experiment_pubs Type: has_many Related object: L =cut __PACKAGE__->has_many( "nd_experiment_pubs", "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentPub", { "foreign.nd_experiment_id" => "self.nd_experiment_id" }, { cascade_copy => 0, cascade_delete => 0 }, ); =head2 nd_experiment_stocks Type: has_many Related object: L =cut __PACKAGE__->has_many( "nd_experiment_stocks", "Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentStock", { "foreign.nd_experiment_id" => "self.nd_experiment_id" }, { cascade_copy => 0, cascade_delete => 0 }, ); # Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59 # DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:rdopd+NuS4NVDr0dVrREnQ =head2 create_nd_experimentprops Usage: $set->create_nd_experimentprops({ baz => 2, foo => 'bar' }); Desc : convenience method to create experiment properties using cvterms from the ontology with the given name Args : hashref of { propname => value, ...}, options hashref as: { autocreate => 0, (optional) boolean, if passed, automatically create cv, cvterm, and dbxref rows if one cannot be found for the given experimentprop name. Default false. cv_name => cv.name to use for the given experimentprops. Defaults to 'nd_experiment_property', db_name => db.name to use for autocreated dbxrefs, default 'null', dbxref_accession_prefix => optional, default 'autocreated:', definitions => optional hashref of: { cvterm_name => definition, } to load into the cvterm table when autocreating cvterms rank => force numeric rank. Be careful not to pass ranks that already exist for the property type. The function will die in such case. allow_duplicate_values => default false. If true, allow duplicate instances of the same experiment and types in the properties of the experiment. Duplicate types will have different ranks. } Ret : hashref of { propname => new experimentprop object } =cut sub create_nd_experimentprops { my ($self, $props, $opts) = @_; # process opts $opts->{cv_name} = 'nd_experiment_property' unless defined $opts->{cv_name}; return Bio::Chado::Schema::Util->create_properties ( properties => $props, options => $opts, row => $self, prop_relation_name => 'nd_experimentprops', ); } 1;