# # @file TestReaction_newSetters.py # @brief Reaction unit tests for new set function API # # @author Akiya Jouraku (Python conversion) # @author Sarah Keating # # ====== WARNING ===== WARNING ===== WARNING ===== WARNING ===== WARNING ====== # # DO NOT EDIT THIS FILE. # # This file was generated automatically by converting the file located at # src/sbml/test/TestReaction_newSetters.c # using the conversion program dev/utilities/translateTests/translateTests.pl. # Any changes made here will be lost the next time the file is regenerated. # # ----------------------------------------------------------------------------- # This file is part of libSBML. Please visit http://sbml.org for more # information about SBML, and the latest version of libSBML. # # Copyright 2005-2010 California Institute of Technology. # Copyright 2002-2005 California Institute of Technology and # Japan Science and Technology Corporation. # # This library is free software; you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as published by # the Free Software Foundation. A copy of the license agreement is provided # in the file named "LICENSE.txt" included with this software distribution # and also available online as http://sbml.org/software/libsbml/license.html # ----------------------------------------------------------------------------- import sys import unittest import libsbml class TestReaction_newSetters(unittest.TestCase): global R R = None def setUp(self): self.R = libsbml.Reaction(1,2) if (self.R == None): pass pass def tearDown(self): _dummyList = [ self.R ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_addProduct1(self): m = libsbml.Reaction(2,2) p = libsbml.SpeciesReference(2,2) p1 = libsbml.SpeciesReference(2,2) p1.setSpecies( "k") p1.setId( "k1") i = m.addProduct(p) self.assertTrue( i == libsbml.LIBSBML_INVALID_OBJECT ) p.setSpecies( "k") p.setId( "k1") i = m.addProduct(p) self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertTrue( m.getNumProducts() == 1 ) i = m.addProduct(p1) self.assertTrue( i == libsbml.LIBSBML_DUPLICATE_OBJECT_ID ) self.assertTrue( m.getNumProducts() == 1 ) _dummyList = [ p ]; _dummyList[:] = []; del _dummyList _dummyList = [ p1 ]; _dummyList[:] = []; del _dummyList _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_addProduct2(self): m = libsbml.Reaction(2,2) p = libsbml.SpeciesReference(2,1) p.setSpecies( "k") i = m.addProduct(p) self.assertTrue( i == libsbml.LIBSBML_VERSION_MISMATCH ) self.assertTrue( m.getNumProducts() == 0 ) _dummyList = [ p ]; _dummyList[:] = []; del _dummyList _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_addProduct3(self): m = libsbml.Reaction(2,2) p = libsbml.SpeciesReference(1,2) p.setSpecies( "k") i = m.addProduct(p) self.assertTrue( i == libsbml.LIBSBML_LEVEL_MISMATCH ) self.assertTrue( m.getNumProducts() == 0 ) _dummyList = [ p ]; _dummyList[:] = []; del _dummyList _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_addProduct4(self): m = libsbml.Reaction(2,2) p = None i = m.addProduct(p) self.assertTrue( i == libsbml.LIBSBML_OPERATION_FAILED ) self.assertTrue( m.getNumProducts() == 0 ) _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_addReactant1(self): m = libsbml.Reaction(2,2) p = libsbml.SpeciesReference(2,2) p1 = libsbml.SpeciesReference(2,2) p1.setSpecies( "k") p1.setId( "k1") i = m.addReactant(p) self.assertTrue( i == libsbml.LIBSBML_INVALID_OBJECT ) p.setSpecies( "k") p.setId( "k1") i = m.addReactant(p) self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertTrue( m.getNumReactants() == 1 ) i = m.addReactant(p1) self.assertTrue( i == libsbml.LIBSBML_DUPLICATE_OBJECT_ID ) self.assertTrue( m.getNumReactants() == 1 ) _dummyList = [ p1 ]; _dummyList[:] = []; del _dummyList _dummyList = [ p ]; _dummyList[:] = []; del _dummyList _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_addReactant2(self): m = libsbml.Reaction(2,2) p = libsbml.SpeciesReference(2,1) p.setSpecies( "k") i = m.addReactant(p) self.assertTrue( i == libsbml.LIBSBML_VERSION_MISMATCH ) self.assertTrue( m.getNumReactants() == 0 ) _dummyList = [ p ]; _dummyList[:] = []; del _dummyList _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_addReactant3(self): m = libsbml.Reaction(2,2) p = libsbml.SpeciesReference(1,2) p.setSpecies( "k") i = m.addReactant(p) self.assertTrue( i == libsbml.LIBSBML_LEVEL_MISMATCH ) self.assertTrue( m.getNumReactants() == 0 ) _dummyList = [ p ]; _dummyList[:] = []; del _dummyList _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_addReactant4(self): m = libsbml.Reaction(2,2) p = None i = m.addReactant(p) self.assertTrue( i == libsbml.LIBSBML_OPERATION_FAILED ) self.assertTrue( m.getNumReactants() == 0 ) _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_createKineticLaw(self): r = libsbml.Reaction(2,2) kl = r.createKineticLaw() self.assertTrue( r.isSetKineticLaw() == True ) self.assertTrue( (kl).getLevel() == 2 ) self.assertTrue( (kl).getVersion() == 2 ) _dummyList = [ r ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_createProduct(self): m = libsbml.Reaction(2,2) p = m.createProduct() self.assertTrue( m.getNumProducts() == 1 ) self.assertTrue( (p).getLevel() == 2 ) self.assertTrue( (p).getVersion() == 2 ) _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_createReactant(self): m = libsbml.Reaction(2,2) p = m.createReactant() self.assertTrue( m.getNumReactants() == 1 ) self.assertTrue( (p).getLevel() == 2 ) self.assertTrue( (p).getVersion() == 2 ) _dummyList = [ m ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_setFast1(self): i = self.R.setFast(True) self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertTrue( self.R.getFast() == True ) self.assertEqual( True, self.R.isSetFast() ) i = self.R.setFast(False) self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertTrue( self.R.getFast() == False ) self.assertEqual( True, self.R.isSetFast() ) i = self.R.unsetFast() self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertTrue( self.R.getFast() == False ) self.assertEqual( False, self.R.isSetFast() ) pass def test_Reaction_setFast2(self): R1 = libsbml.Reaction(2,4) i = R1.unsetFast() self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertTrue( R1.getFast() == False ) self.assertEqual( False, R1.isSetFast() ) pass def test_Reaction_setId1(self): i = self.R.setId( "1cell") self.assertTrue( i == libsbml.LIBSBML_INVALID_ATTRIBUTE_VALUE ) self.assertEqual( False, self.R.isSetId() ) pass def test_Reaction_setId2(self): i = self.R.setId( "cell") self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( True, self.R.isSetId() ) self.assertTrue(( "cell" == self.R.getId() )) i = self.R.setId("") self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( False, self.R.isSetId() ) pass def test_Reaction_setKineticLaw1(self): kl = libsbml.KineticLaw(2,1) kl.setMath(libsbml.parseFormula("1")) i = self.R.setKineticLaw(kl) self.assertTrue( i == libsbml.LIBSBML_LEVEL_MISMATCH ) self.assertEqual( False, self.R.isSetKineticLaw() ) _dummyList = [ kl ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_setKineticLaw2(self): kl = libsbml.KineticLaw(1,1) kl.setMath(libsbml.parseFormula("1")) i = self.R.setKineticLaw(kl) self.assertTrue( i == libsbml.LIBSBML_VERSION_MISMATCH ) self.assertEqual( False, self.R.isSetKineticLaw() ) _dummyList = [ kl ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_setKineticLaw3(self): kl = libsbml.KineticLaw(1,2) kl.setMath(libsbml.parseFormula("1")) i = self.R.setKineticLaw(kl) self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( True, self.R.isSetKineticLaw() ) _dummyList = [ kl ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_setKineticLaw4(self): i = self.R.setKineticLaw(None) self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( False, self.R.isSetKineticLaw() ) i = self.R.unsetKineticLaw() self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( False, self.R.isSetKineticLaw() ) pass def test_Reaction_setName1(self): i = self.R.setName( "cell") self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( True, self.R.isSetName() ) i = self.R.unsetName() self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( False, self.R.isSetName() ) pass def test_Reaction_setName2(self): p = libsbml.Reaction(2,2) i = p.setName( "1cell") self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( True, p.isSetName() ) i = p.unsetName() self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( False, p.isSetName() ) _dummyList = [ p ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_setName3(self): p = libsbml.Reaction(2,2) i = p.setName("") self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertEqual( False, p.isSetName() ) _dummyList = [ p ]; _dummyList[:] = []; del _dummyList pass def test_Reaction_setReversible1(self): i = self.R.setReversible(True) self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertTrue( self.R.getReversible() == True ) i = self.R.setReversible(False) self.assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS ) self.assertTrue( self.R.getReversible() == False ) pass def suite(): suite = unittest.TestSuite() suite.addTest(unittest.TestLoader.loadTestsFromTestCase(TestReaction_newSetters)) return suite if __name__ == "__main__": if unittest.TextTestRunner(verbosity=1).run(suite()).wasSuccessful() : sys.exit(0) else: sys.exit(1)