Index of /data/main/p/pbbam/2.4.0+dfsg-4/src

• Parent Directory
• AlignmentPrinter.cpp
• Autovalidate.h
• BaiIndexCache.cpp
• BaiIndexedBamReader.cpp
• BamFile.cpp
• BamFileMerger.cpp
• BamHeader.cpp
• BamReader.cpp
• BamRecord.cpp
• BamRecordImpl.cpp
• BamRecordTags.cpp
• BamRecordTags.h
• BamRecordView.cpp
• BamTagCodec.cpp
• BamWriter.cpp
• BgzipFastaWriter.cpp
• BgzipFastqWriter.cpp
• BgzipWriter.cpp
• ChemistryTable.cpp
• ChemistryTable.h
• CollectionMetadata.cpp
• Compare.cpp
• CompositeBamReader.cpp
• CompositeFastaReader.cpp
• Config.cpp
• DataSet.cpp
• DataSetBaseTypes.cpp
• DataSetElement.cpp
• DataSetIO.cpp
• DataSetIO.h
• DataSetTypes.cpp
• DataSetUtils.h
• DataSetXsd.cpp
• EntireFileQuery.cpp
• ErrnoReason.cpp
• ErrnoReason.h
• FaiIndex.cpp
• FaiZmwChunker.cpp
• FaiZmwChunker.h
• FastaCache.cpp
• FastaReader.cpp
• FastaSequence.cpp
• FastaSequenceQuery.cpp
• FastaWriter.cpp
• FastqReader.cpp
• FastqSequence.cpp
• FastqWriter.cpp
• FileProducer.cpp
• FileProducer.h
• FileUtils.cpp
• FileUtils.h
• FofnReader.cpp
• FofnReader.h
• FormatUtils.cpp
• GenomicIntervalQuery.cpp
• IFastaWriter.cpp
• IFastqWriter.cpp
• IRecordWriter.cpp
• IndexedBamWriter.cpp
• IndexedFastaReader.cpp
• IndexedFastqBgzfReader.cpp
• IndexedFastqBgzfReader.h
• IndexedFastqReader.cpp
• IndexedFastqReaderImpl.cpp
• IndexedFastqReaderImpl.h
• IndexedFastqTextReader.cpp
• IndexedFastqTextReader.h
• KSeqReader.cpp
• KSeqReader.h
• LibraryGitHash.h.in
• LibraryInfo.cpp
• LibraryVersion.h.in
• MD5.cpp
• MemoryUtils.cpp
• MemoryUtils.h
• PbbamGitHash.cpp.in
• PbbamInternalConfig.h
• PbbamVersion.cpp.in
• PbiBuilder.cpp
• PbiBuilderBase.cpp
• PbiBuilderBase.h
• PbiFile.cpp
• PbiFilter.cpp
• PbiFilterQuery.cpp
• PbiFilterTypes.cpp
• PbiIndexIO.cpp
• PbiIndexIO.h
• PbiIndexedBamReader.cpp
• PbiRawData.cpp
• ProgramInfo.cpp
• Pulse2BaseCache.h
• ReadGroupInfo.cpp
• RecordType.cpp
• RunMetadata.cpp
• RunMetadataParser.cpp
• RunMetadataParser.h
• SamReader.cpp
• SamTagCodec.cpp
• SamWriter.cpp
• SequenceInfo.cpp
• SequenceUtils.h
• StringUtilities.cpp
• Tag.cpp
• TagCollection.cpp
• TextFileReader.cpp
• TextFileWriter.cpp
• TimeUtils.cpp
• TimeUtils.h
• ValidationErrors.cpp
• ValidationErrors.h
• ValidationException.cpp
• Validator.cpp
• Version.cpp
• Version.h
• VirtualRegion.cpp
• VirtualRegionTypeMap.cpp
• VirtualStitching.h
• VirtualZmwBamRecord.cpp
• VirtualZmwCompositeReader.cpp
• VirtualZmwCompositeReader.h
• VirtualZmwReader.cpp
• VirtualZmwReader.h
• WhitelistedZmwReadStitcher.cpp
• XmlReader.cpp
• XmlReader.h
• XmlWriter.cpp
• XmlWriter.h
• ZmwChunkedFastaReader.cpp
• ZmwChunkedFastqReader.cpp
• ZmwChunkedFastxBgzfReader.cpp
• ZmwChunkedFastxBgzfReader.h
• ZmwChunkedFastxReaderImpl.cpp
• ZmwChunkedFastxReaderImpl.h
• ZmwChunkedFastxTextReader.cpp
• ZmwChunkedFastxTextReader.h
• ZmwGroupQuery.cpp
• ZmwQuery.cpp
• ZmwReadStitcher.cpp
• ZmwTypeMap.cpp
• bed/
• csv/
• meson.build
• pugixml/
• vcf/