import numpy as np

from ase import Atoms


def ptable(spacing=2.5):
    '''Generates the periodic table as an Atoms oobject to help with visualizing
    rendering and color palette settings.'''
    # generates column, row positions for each element
    zmax = 118
    x, y = 1, 1  # column, row , initial coordinates for Hydrogen
    positions = np.zeros((zmax + 1, 3))
    for z in range(1, zmax + 1):  # z is atomic number not, position
        if z == 2:
            x += 16
        if z == 5:
            x += 10
        if z == 13:
            x += 10
        if z == 57 or z == 89:
            y += 3
        if z == 72 or z == 104:
            y -= 3
            x -= 14
        positions[z] = (x, -y, 0)
        x += 1
        if x > 18:
            x = 1
            y += 1
    atoms = Atoms(np.arange(1, zmax + 1),
                  positions[1:] * spacing)

    return atoms