######################################## # Program: water # Rundate: Sat 22 Oct 2022 22:56:15 # Commandline: water # -asequence seqA.fa # -bsequence seqB.fa # -gapopen 1 # -gapextend 0.5 # -sreverse2 # -outfile water_reverse4.txt # Align_format: srspair # Report_file: water_reverse4.txt ######################################## #======================================= # # Aligned_sequences: 2 # 1: seqA # 2: seqB # Matrix: EDNAFULL # Gap_penalty: 1.0 # Extend_penalty: 0.5 # # Length: 19 # Identity: 16/19 (84.2%) # Similarity: 16/19 (84.2%) # Gaps: 3/19 (15.8%) # Score: 77.5 # # #======================================= seqA 3 GGGCCCGGTT-TAAAAAAA 20 |||||||| |||||||| seqB 19 GGGCCCGG--GTAAAAAAA 3 #--------------------------------------- #---------------------------------------