Index of /data/main/p/python-cogent/1.5.3-2/doc/examples

• Parent Directory
• DisplayPolicy_key.pdf
• align_codons_to_protein.rst
• alignment_app_controllers.rst
• aln_profile.rst
• application_controller_framework.rst
• building_and_using_an_application_controller.rst
• calculate_UPGMA_cluster.rst
• calculate_neigbourjoining_tree.rst
• calculate_pairwise_distances.rst
• codon_models.rst
• coevolution.rst
• complete_seq_features.rst
• draw_dendrogram.rst
• draw_dotplot.rst
• empirical_protein_models.rst
• entity_selection.rst
• estimate_startingpoint.rst
• generating_app_commandlines.rst
• genetic_code_aa_index.rst
• goodness_of_fit.rst
• handling_3dstructures.rst
• handling_tabular_data.rst
• hmm_par_heterogeneity.rst
• index.rst
• maketree_from_proteinseqs.rst
• manipulating_tree_nodes.rst
• motif_results.rst
• neutral_test.rst
• parametric_bootstrap.rst
• perform_PCoA_analysis.rst
• perform_nmds.rst
• period_estimation.rst
• phylo_by_ls.rst
• phylogeny_app_controllers.rst
• query_ensembl.rst
• query_ncbi.rst
• rate_heterogeneity.rst
• relative_rate.rst
• reuse_results.rst
• reverse_complement.rst
• scope_model_params_on_trees.rst
• seq_features.rst
• seqsim_alignment_simulation.rst
• seqsim_aln_sim_user_alphabet.rst
• seqsim_tree_sim.rst
• simple.rst
• simulate_alignment.rst
• testing_multi_loci.rst
• translate_dna.rst
• unifrac.rst
• unrestricted_nucleotide.rst
• using_parallel.py