Description: Adjust to the transfer of local code to Chemistry::OpenSMILES
 distribution, which took place in upstream commit 542.
Author: Andrius Merkys <merkys@debian.org>
Forwarded: not-needed
--- a/scripts/smi_canonicalise
+++ b/scripts/smi_canonicalise
@@ -3,13 +3,12 @@
 use strict;
 use warnings;
 
-use Chemistry::OpenSMILES;
+use Chemistry::OpenSMILES qw( is_cis_trans_bond );
 use Chemistry::OpenSMILES::Aromaticity qw( aromatise kekulise );
 use Chemistry::OpenSMILES::Parser;
 use Chemistry::OpenSMILES::Stereo qw(
     chirality_to_pseudograph
     cis_trans_to_pseudoedges
-    is_cis_trans_bond
     mark_all_double_bonds
 );
 use Chemistry::OpenSMILES::Writer qw( write_SMILES );
--- a/scripts/smi_isomorphism
+++ b/scripts/smi_isomorphism
@@ -3,11 +3,10 @@
 use strict;
 use warnings;
 
-use Chemistry::OpenSMILES qw( clean_chiral_centers );
+use Chemistry::OpenSMILES qw( clean_chiral_centers is_cis_trans_bond );
 use Chemistry::OpenSMILES::Stereo qw(
     chirality_to_pseudograph
     cis_trans_to_pseudoedges
-    is_cis_trans_bond
     mark_all_double_bonds
 );
 use Chemistry::OpenSMILES::Parser;
--- a/tests/outputs/smi_isomorphism_017.out
+++ b/tests/outputs/smi_isomorphism_017.out
@@ -1,13 +1 @@
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 33 and 34 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 11 and 47 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 19 and 20 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 33 and 34 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 11 and 47 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 19 and 20 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 11 and 47 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 33 and 34 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 19 and 20 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 11 and 47 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 33 and 34 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 19 and 20 as there are no eligible single bonds nearby
 XXXXXXX	C1(=CC=CC=C1)C1=NN=C(O1)S(C=1C(=C(C(=C(C1C)S(=C)C=1OC(=NN1)C1=CC=CC=C1)C)S(=C)C=1OC(=NN1)C1=CC=CC=C1)C)=C	S(Cc1c(c(c(c(c1C)CSc1oc(nn1)c1ccccc1)C)CSc1oc(nn1)c1ccccc1)C)c1oc(nn1)c1ccccc1	nonmatching single moieties
--- a/tests/outputs/smi_isomorphism_031.out
+++ b/tests/outputs/smi_isomorphism_031.out
@@ -1,6 +1,4 @@
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 3 and 4 as there are no eligible single bonds nearby
 scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 1 and 2 as there are no eligible single bonds nearby
-scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 3 and 4 as there are no eligible single bonds nearby
 scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 1 and 2 as there are no eligible single bonds nearby
 scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 1 and 2 as there are no eligible single bonds nearby
 scripts/smi_isomorphism: -(1) XXXXXXX: cannot represent cis/trans bond between atoms 1 and 2 as there are no eligible single bonds nearby