Description: small style change to display usage information
Author: Dominique Belhachemi <domibel@debian.org>

Index: tvc-5.0.2+dfsg/VariantCaller/Bookkeeping/ExtendParameters.cpp
===================================================================
--- tvc-5.0.2+dfsg.orig/VariantCaller/Bookkeeping/ExtendParameters.cpp
+++ tvc-5.0.2+dfsg/VariantCaller/Bookkeeping/ExtendParameters.cpp
@@ -77,7 +77,11 @@ void VariantCallerHelp() {
   printf("\n");
 
   printf("Advanced variant candidate scoring options:\n");
+#ifdef __SSE3__
   printf("     --use-sse-basecaller               on/off      Switch to use the vectorized version of the basecaller [on].\n");
+#else
+  printf("     --use-sse-basecaller               on/off      Switch to use the vectorized version of the basecaller [off].\n");
+#endif
   printf("     --resolve-clipped-bases            on/off      If 'true', the basecaller is used to solve soft clipped bases [off].\n");
   printf("     --prediction-precision             FLOAT       prior weight in bias estimator [30.0]\n");
   printf("     --shift-likelihood-penalty         FLOAT       penalize log-likelihood for solutions involving large systematic bias [0.3]\n");
@@ -147,7 +151,7 @@ void VariantCallerHelp() {
   printf("Debugging:\n");
   printf("  -d,--debug                            INT         (0/1/2) display extra debug messages [0]\n");
   printf("     --do-json-diagnostic               on/off      (devel) dump internal state to json file (uses much more time/memory/disk) [off]\n");
-  printf("     --postprocessed-bam                FILE        (devel) save tvc-processed reads to an (unsorted) BAM file [optional]");
+  printf("     --postprocessed-bam                FILE        (devel) save tvc-processed reads to an (unsorted) BAM file [optional]\n");
   printf("     --do-minimal-diagnostic            on/off      (devel) provide minimal read information for called variants [off]\n");
   printf("     --override-limits                  on/off      (devel) disable limit-check on input parameters [off].\n");
   printf("\n");