Package: abyss / 2.0.2-2

Metadata

Package Version Patches format
abyss 2.0.2-2 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
abyss pe.patch | (download)

bin/abyss-pe | 2 2 + 0 - 0 !
1 file changed, 2 insertions(+)

 add internal path to find abyss tools


abyss 32 bit.patch | (download)

Common/StringUtil.h | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

 fix ftbfs on 32-bit architectures
 Version 1.5.2-1 of abyss FTBFS on 32-bit architectures (armhf, i386 and
 powerpc). Previous versions built fine on all architectures.
 .
 There were a couple of places in the code that was introduced in version
 1.5.2 where size_t data type was used instead of a fixed size data type.
 The patch builds on amd64, i386 and armhf with and all unit tests passed.
 .
 Question: is this software useful on a 32-bit system at all?


fix_bash_script.patch | (download)

DataBase/abyss-db-txt | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 script uses bash syntax so request bash interpreter


big_endian.patch | (download)

Common/Kmer.cpp | 14 7 + 7 - 0 !
1 file changed, 7 insertions(+), 7 deletions(-)

 fix ftbfs on mips and other big-endian architectures