align/Amap.cc | 3 3 + 0 - 0 !
align/MultiSequenceDag.h | 1 1 + 0 - 0 !
2 files changed, 4 insertions(+)

 allows building with gcc-4.3.

align/SafeVector.h | 1 1 + 0 - 0 !
1 file changed, 1 insertion(+)

 add header file needed for gcc-4.6

align/Makefile | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

 propagate hardening options

align/Amap.cc | 6 6 + 0 - 0 !
1 file changed, 6 insertions(+)

 this patch is a bit non-c++-ish but i'm not a c++
 programmer and considered this at least a solution and code that
 ignores getopt does not deserve more care. :-(