Package: beast-mcmc / 1.8.4+dfsg.1-3

Metadata

Package Version Patches format
beast-mcmc 1.8.4+dfsg.1-3 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
enable_hardening.patch | (download)

native/Makefile.linux | 6 3 + 3 - 0 !
1 file changed, 3 insertions(+), 3 deletions(-)

 enable propagation of hardening flags
fix_classpath_in_build_xml.patch | (download)

.classpath | 26 11 + 15 - 0 !
build.xml | 27 14 + 13 - 0 !
2 files changed, 25 insertions(+), 28 deletions(-)

 make sure package builds with debian packages jars
patch_tex_docs.patch | (download)

doc/BEAST14_Manual.tex | 2 1 + 1 - 0 !
doc/BookSection/BookSection.tex | 3 2 + 1 - 0 !
doc/SerialSampleCoalescent.tex | 2 1 + 1 - 0 !
doc/Yule.tex | 1 1 + 0 - 0 !
doc/tutorial/Virus_Practical_1_6_1/Practical_BEAST.tex | 2 1 + 1 - 0 !
5 files changed, 6 insertions(+), 4 deletions(-)

 fix some latex error that are preventing proper creation of docs
fix_classpath_in_build_tracer_xml.patch | (download)

build_tracer.xml | 97 6 + 91 - 0 !
1 file changed, 6 insertions(+), 91 deletions(-)

 make sure also tracer is builded with debian packages jars


create_soname.patch | (download)

native/Makefile.linux | 6 3 + 3 - 0 !
1 file changed, 3 insertions(+), 3 deletions(-)

 create soname for library
fix_encoding.patch | (download)

src/dr/app/beauti/components/discrete/DiscreteTraitsComponentGenerator.java | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

 fix encoding issue


tex_encoding.patch | (download)

doc/BEAST14_Manual.tex | 1 1 + 0 - 0 !
doc/tutorial/Virus_Practical_1_6_1/Practical_BEAST.tex | 2 2 + 0 - 0 !
2 files changed, 3 insertions(+)

 fix encoding issues that caused ftbfs with tex live 2018