src/lengthdistribution.cpp | 2 1 + 1 - 0 !
src/main.cpp | 2 1 + 1 - 0 !
src/markovmodel.h | 2 1 + 1 - 0 !
3 files changed, 3 insertions(+), 3 deletions(-)

 correct upstream typos

CMakeLists.txt | 9 6 + 3 - 0 !
src/mismatchmodel.cpp | 4 2 + 2 - 0 !
2 files changed, 8 insertions(+), 5 deletions(-)

 fix path to debian packaged bamtools

CMakeLists.txt | 1 0 + 1 - 0 !
src/CMakeLists.txt | 2 1 + 1 - 0 !
2 files changed, 1 insertion(+), 2 deletions(-)

 drop unused zlib dependency

CMakeLists.txt | 13 6 + 7 - 0 !
src/CMakeLists.txt | 4 2 + 2 - 0 !
2 files changed, 8 insertions(+), 9 deletions(-)

 remove forced flags and set dynamic linking 
 Remove the forced flags so that Debian flags will be used, and 
 link dynamically to all libraries

html/faq.html | 11 0 + 11 - 0 !
html/index.html | 11 0 + 11 - 0 !
html/manual.html | 11 0 + 11 - 0 !
html/overview.html | 11 0 + 11 - 0 !
html/tutorial.html | 11 0 + 11 - 0 !
src/main.cpp | 10 0 + 10 - 0 !
src/update_check.h | 120 0 + 120 - 0 !
7 files changed, 185 deletions(-)

 avoid privace breach js in html doc