Package: bioperl / 1.7.8-2

Metadata

Package Version Patches format
bioperl 1.7.8-2 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
0001 fix error popping up with latest perl releases a80e8a655a953301f71538f9088a613eb63d5a73.patch | (download)

lib/Bio/Tools/Alignment/Consed.pm | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 [patch] fix error popping up with latest perl releases

0001 fix error popping up with latest perl releases 01ba1a675c80e7f8b77e05be9055d1208f246083.patch | (download)

bin/bp_find-blast-matches | 6 3 + 3 - 0 !
1 file changed, 3 insertions(+), 3 deletions(-)

 [patch] fix error popping up with latest perl releases

perl 5.42 precedence.patch | (download)

lib/Bio/AlignIO/Handler/GenericAlignHandler.pm | 2 1 + 1 - 0 !
lib/Bio/SeqIO/Handler/GenericRichSeqHandler.pm | 2 1 + 1 - 0 !
2 files changed, 2 insertions(+), 2 deletions(-)

 fix warnings with perl 5.42
 Possible precedence problem between ! and numeric eq (==) at /build/bioperl-1.7.8/blib/lib/Bio/AlignIO/Handler/GenericAlignHandler.pm line 98.
 Possible precedence problem between ! and numeric eq (==) at /build/bioperl-1.7.8/blib/lib/Bio/SeqIO/Handler/GenericRichSeqHandler.pm line 379.