Package: bowtie / 1.2.2+dfsg-4

fix_isa_return.patch Patch series | download
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Subject: Fix isa return type
From: ch4rr0
Comment:
 see https://github.com/BenLangmead/bowtie/commit/58c6ac97b1938909881877ef83167f5eff0e8ab1
--- bowtie.orig/ebwt.h
+++ bowtie/ebwt.h
@@ -862,7 +862,7 @@
 	TIndexOffU*   ftab() const         { return _ftab; }
 	TIndexOffU*   eftab() const        { return _eftab; }
 	TIndexOffU*   offs() const         { return _offs; }
-	uint32_t*   isa() const          { return _isa; } /* check */
+	TIndexOffU*   isa() const          { return _isa; } /* check */
 	TIndexOffU*   plen() const         { return _plen; }
 	TIndexOffU*   rstarts() const      { return _rstarts; }
 	uint8_t*    ebwt() const         { return _ebwt; }