Package: emboss / 6.6.0+dfsg-18

Metadata

Package Version Patches format
emboss 6.6.0+dfsg-18 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
using pager in tfm.patch | (download)

emboss/tfm.c | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 browse the documentation with default pager.
 `/usr/bin/pager', always exists in Debian and is managed through the
 alternatives system. With this patch, `tfm' will use `/usr/bin/pager' by
 default, which points on the user's favorite pager.
License: as if it were public domain.

tfm html.patch | (download)

emboss/tfm.c | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 corrects the name of the directory where tfm looks for html documentation.

fix postgresql macro.patch | (download)

m4/postgresql.m4 | 6 3 + 3 - 0 !
1 file changed, 3 insertions(+), 3 deletions(-)

 enable linking pgsqlclient with linker set for --as-needed
fix mysql macro.patch | (download)

m4/mysql.m4 | 6 3 + 3 - 0 !
1 file changed, 3 insertions(+), 3 deletions(-)

 enable linking mysqlclient with linker set for --as-needed
bashism.patch | (download)

jemboss/utils/install-jemboss-server.sh | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 avoid bashism


plplotP correct padding.patch | (download)

plplot/plplotP.h | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 correct the padding to make it consistent 
remove_non free_doc.patch | (download)

doc/manuals/Makefile.am | 7 0 + 7 - 0 !
1 file changed, 7 deletions(-)

 cleanup makefile.am from non-free docs


path_max.patch | (download)

ajax/core/ajfile.c | 5 3 + 2 - 0 !
1 file changed, 3 insertions(+), 2 deletions(-)

 path_max is missing on hurd so avoid this


no_makejar.patch | (download)

jemboss/lib/Makefile.am | 1 0 + 1 - 0 !
jemboss/runJemboss.sh.in | 4 3 + 1 - 0 !
jemboss/utils/Makefile.am | 1 0 + 1 - 0 !
3 files changed, 3 insertions(+), 3 deletions(-)

---
com_sun_net_deprecation.patch | (download)

jemboss/org/emboss/jemboss/FileManager.java | 15 0 + 15 - 0 !
jemboss/org/emboss/jemboss/Jemboss.java | 15 0 + 15 - 0 !
jemboss/org/emboss/jemboss/server/TestPrivateServer.java | 16 0 + 16 - 0 !
jemboss/org/emboss/jemboss/server/TestPublicServer.java | 15 0 + 15 - 0 !
4 files changed, 61 deletions(-)

 com.sun should not be called directly
 and now have been removed from JDK.
 Upstream author has been contacted about issue
rename bool variable.patch | (download)

ajax/core/ajsql.c | 128 64 + 64 - 0 !
1 file changed, 64 insertions(+), 64 deletions(-)

---
fix va define s390x.patch | (download)

ajax/core/ajfmt.c | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 check for s390x arch when defining valist items in ajfmt.c
fix ajulong nkeys s390x.patch | (download)

ajax/core/ajindex.c | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 fix segfault on s390x
Bug-Debian: https://bugs.debian.org/1069098