make/Makefile.linux32 | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 makefile

scripts/test_py.sh | 18 0 + 18 - 0 !
test/test.sh | 58 0 + 58 - 0 !
test/test2G.sh | 112 56 + 56 - 0 !
3 files changed, 56 insertions(+), 132 deletions(-)

 disable tests that require external databases

psisearch2/clustal2fasta.pl | 2 1 + 1 - 0 !
psisearch2/clustal2fasta.py | 2 1 + 1 - 0 !
psisearch2/m89_btop_msa2.pl | 2 1 + 1 - 0 !
psisearch2/psisearch2_msa.pl | 4 2 + 2 - 0 !
psisearch2/psisearch2_msa.py | 10 5 + 5 - 0 !
psisearch2/psisearch2_msa_iter.sh | 4 2 + 2 - 0 !
psisearch2/psisearch2_msa_iter_bl.sh | 2 1 + 1 - 0 !
scripts/ann_exons_all.pl | 2 1 + 1 - 0 !
scripts/ann_exons_ens.pl | 2 1 + 1 - 0 !
scripts/ann_exons_ncbi.pl | 2 1 + 1 - 0 !
scripts/ann_exons_up_sql.pl | 2 1 + 1 - 0 !
scripts/ann_exons_up_sql_www.pl | 2 1 + 1 - 0 !
scripts/ann_exons_up_www.pl | 2 1 + 1 - 0 !
scripts/ann_feats2ipr.pl | 2 1 + 1 - 0 !
scripts/ann_feats2ipr_e.pl | 2 1 + 1 - 0 !
scripts/ann_feats_up_sql.pl | 2 1 + 1 - 0 !
scripts/ann_feats_up_www2.pl | 2 1 + 1 - 0 !
scripts/ann_ipr_www.pl | 2 1 + 1 - 0 !
scripts/ann_pdb_cath.pl | 2 1 + 1 - 0 !
scripts/ann_pdb_vast.pl | 2 1 + 1 - 0 !
scripts/ann_pfam30_tmptbl.pl | 2 1 + 1 - 0 !
scripts/ann_pfam_sql.pl | 2 1 + 1 - 0 !
scripts/ann_pfam_www.pl | 2 1 + 1 - 0 !
scripts/ann_script_list | 14 5 + 9 - 0 !
scripts/ann_upfeats_pfam_www_e.pl | 2 1 + 1 - 0 !
scripts/annot_blast_btop2.pl | 2 1 + 1 - 0 !
scripts/annot_blast_btop3.py | 2 1 + 1 - 0 !
scripts/annot_blast_btop4.py | 2 1 + 1 - 0 !
scripts/blastp_annot_cmd.sh | 6 3 + 3 - 0 !
scripts/blastp_cmd.sh | 2 1 + 1 - 0 !
scripts/exp_up_ensg.pl | 2 1 + 1 - 0 !
scripts/expand_links.pl | 2 1 + 1 - 0 !
scripts/expand_refseq_isoforms.pl | 2 1 + 1 - 0 !
scripts/expand_uniref50.pl | 2 1 + 1 - 0 !
scripts/expand_up_isoforms.pl | 2 1 + 1 - 0 !
scripts/fasta_annot_cmd.sh | 6 3 + 3 - 0 !
scripts/get_genome_seq.py | 2 1 + 1 - 0 !
scripts/get_protein.py | 2 1 + 1 - 0 !
scripts/get_protein_sql.py | 2 1 + 1 - 0 !
scripts/get_protein_sql_www.py | 2 1 + 1 - 0 !
scripts/get_refseq.py | 2 1 + 1 - 0 !
scripts/get_uniprot.py | 2 1 + 1 - 0 !
scripts/get_up_prot_iso_sql.py | 2 1 + 1 - 0 !
scripts/lav2plt.pl | 2 1 + 1 - 0 !
scripts/lavplt_ps.pl | 2 1 + 1 - 0 !
scripts/lavplt_svg.pl | 2 1 + 1 - 0 !
scripts/links2sql.pl | 2 1 + 1 - 0 !
scripts/m8_btop_msa.pl | 2 1 + 1 - 0 !
scripts/m9B_btop_msa.pl | 2 1 + 1 - 0 !
scripts/map_exon_coords.py | 2 1 + 1 - 0 !
scripts/merge_blast_btab.pl | 2 1 + 1 - 0 !
scripts/merge_fasta_btab.pl | 2 1 + 1 - 0 !
scripts/relabel_domains.py | 2 1 + 1 - 0 !
scripts/rename_exons.py | 2 1 + 1 - 0 !
scripts/summ_domain_ident.pl | 2 1 + 1 - 0 !
scripts/test_ann_scripts.sh | 22 11 + 11 - 0 !
scripts/test_py.sh | 44 22 + 22 - 0 !
57 files changed, 102 insertions(+), 106 deletions(-)

 adjust for installed use