Makefile | 9 6 + 3 - 0 !
1 file changed, 6 insertions(+), 3 deletions(-)

 add soname to linker call in makefile 
 Upstream Makefile does not build a shared object with soname or version 
 number. This patch adds support for sonames, as well a symlink from
 the .so to the .so.X file.

Makefile | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 do not use -m64 in arm64.

Makefile | 18 16 + 2 - 0 !
1 file changed, 16 insertions(+), 2 deletions(-)

 add static link to libbam.a
 The Debian libbam package only provides a static library to link to,
 adding this to the Makefile.

doc/devguide/.gitignore | 1 0 + 1 - 0 !
doc/manuals/.gitignore | 8 0 + 8 - 0 !
2 files changed, 9 deletions(-)

 remove unneeded .gitignores or .gitignore entries

src/core/output_file.c | 6 6 + 0 - 0 !
src/core/seq_iterator_fastq.c | 8 8 + 0 - 0 !
2 files changed, 14 insertions(+)

 add missing/renamed function wrappers.

doc/manuals/matstat.tex | 162 160 + 2 - 0 !
doc/manuals/uniquesub.tex | 86 0 + 86 - 0 !
2 files changed, 160 insertions(+), 88 deletions(-)

 split manuals.