Makefile.in | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 fix manpage extension

Makefile.in | 7 0 + 7 - 0 !
configure.ac | 4 0 + 4 - 0 !
src/Makefile.in | 4 1 + 3 - 0 !
3 files changed, 1 insertion(+), 14 deletions(-)

 use debian packaged libdivsufsort

Makefile.in | 46 23 + 23 - 0 !
easel/Makefile.in | 6 3 + 3 - 0 !
src/Makefile.in | 4 2 + 2 - 0 !
3 files changed, 28 insertions(+), 28 deletions(-)

 allow the easel makefile to be verbosely run from the hmmer makefile

configure.ac | 22 5 + 17 - 0 !
easel/Makefile.in | 4 2 + 2 - 0 !
src/Makefile.in | 4 2 + 2 - 0 !
3 files changed, 9 insertions(+), 21 deletions(-)

 don't stomp on debian's cflags

testsuite/i19-hmmpgmd-ga.pl | 10 5 + 5 - 0 !
1 file changed, 5 insertions(+), 5 deletions(-)

 skip check for threads

easel/Makefile.in | 8 4 + 4 - 0 !
src/Makefile.in | 8 4 + 4 - 0 !
2 files changed, 8 insertions(+), 8 deletions(-)

 enable parallel sub-builds

documentation/man/alimask.man.in | 2 1 + 1 - 0 !
documentation/man/hmmbuild.man.in | 2 1 + 1 - 0 !
documentation/man/jackhmmer.man.in | 2 1 + 1 - 0 !
documentation/man/nhmmer.man.in | 2 1 + 1 - 0 !
documentation/userguide/introduction.tex | 2 1 + 1 - 0 !
easel/esl_ratematrix.c | 2 1 + 1 - 0 !
easel/esl_ratematrix.tex | 2 1 + 1 - 0 !
easel/miniapps/esl-alimask.c | 2 1 + 1 - 0 !
src/nhmmer.c | 2 1 + 1 - 0 !
9 files changed, 9 insertions(+), 9 deletions(-)

 fix a typo