Package: jellyfish / 2.2.10-2

Metadata

Package Version Patches format
jellyfish 2.2.10-2 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
manpage_whatis_entry.patch | (download)

doc/jellyfish.man | 9 3 + 6 - 0 !
1 file changed, 3 insertions(+), 6 deletions(-)

 fix whatis entry in manpage (also fix some spelling issues)


reproducible.patch | (download)

include/jellyfish/generic_file_header.hpp | 14 14 + 0 - 0 !
1 file changed, 14 insertions(+)

 enable reproducible build by avoiding the current
 date with time zone in json output


portability.patch | (download)

include/jellyfish/rectangular_binary_matrix.hpp | 30 21 + 9 - 0 !
1 file changed, 21 insertions(+), 9 deletions(-)

 replace asm statements by c code to increase portability
Note: Does not work as described - needs verification


fix_catch.patch | (download)

include/jellyfish/hash_counter.hpp | 2 1 + 1 - 0 !
sub_commands/count_main.cc | 2 1 + 1 - 0 !
sub_commands/merge_main.cc | 2 1 + 1 - 0 !
sub_commands/query_main.cc | 4 2 + 2 - 0 !
4 files changed, 5 insertions(+), 5 deletions(-)

 catch exceptions by reference
  see https://blog.knatten.org/2010/04/02/always-catch-exceptions-by-referenc


fix_replacement_of_ L_option.patch | (download)

examples/count_in_file/Makefile | 2 1 + 1 - 0 !
examples/jf_count_dump/Makefile | 2 1 + 1 - 0 !
examples/query_per_sequence/Makefile | 2 1 + 1 - 0 !
swig/Tuprules.tup | 2 1 + 1 - 0 !
swig/perl5/Makefile.PL | 2 1 + 1 - 0 !
swig/python/setup.py | 2 1 + 1 - 0 !
swig/ruby/extconf.rb | 2 1 + 1 - 0 !
7 files changed, 7 insertions(+), 7 deletions(-)

 do not replace random '-l' strings in command line
Bug-Debian: https://bugs.debian.org/907819