Package: kmc / 2.3+dfsg-7

Metadata

Package Version Patches format
kmc 2.3+dfsg-7 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
disable asmlib | (download)

makefile | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

 disable-asmlib
use shared libs | (download)

kmc_tools/fastq_reader.h | 6 3 + 3 - 0 !
kmer_counter/fastq_reader.h | 4 2 + 2 - 0 !
makefile | 23 4 + 19 - 0 !
3 files changed, 9 insertions(+), 24 deletions(-)

 use-shared-libs
hardening | (download)

makefile | 24 12 + 12 - 0 !
1 file changed, 12 insertions(+), 12 deletions(-)

 hardening
0005 Add static library target to makefile.patch | (download)

makefile | 9 9 + 0 - 0 !
1 file changed, 9 insertions(+)

 add static library target to makefile
0007 Use standard compiler environment variables.patch | (download)

makefile | 27 11 + 16 - 0 !
1 file changed, 11 insertions(+), 16 deletions(-)

 use standard compiler environment variables- cxx for g++, not cc
 - LDFLAGS for the linker
 - CXXFLAGS not CFLAGS for C++ compilation
spelling | (download)

kmc_tools/config.h | 12 6 + 6 - 0 !
kmc_tools/kmc1_db_writer.h | 24 12 + 12 - 0 !
kmc_tools/kmc2_db_reader.h | 8 4 + 4 - 0 !
kmc_tools/parameters_parser.cpp | 12 6 + 6 - 0 !
kmc_tools/parameters_parser.h | 6 3 + 3 - 0 !
kmc_tools/parser.cpp | 4 2 + 2 - 0 !
kmer_counter/bkb_sorter.h | 2 1 + 1 - 0 !
kmer_counter/kb_sorter.h | 2 1 + 1 - 0 !
kmer_counter/radix.cpp | 2 1 + 1 - 0 !
kmer_counter/s_mapper.h | 6 3 + 3 - 0 !
10 files changed, 39 insertions(+), 39 deletions(-)

 fix spelling 
newish_gcc_build_fix.patch | (download)

kmc_dump/nc_utils.h | 3 2 + 1 - 0 !
1 file changed, 2 insertions(+), 1 deletion(-)

 add required header for std::modf