Package: lambda-align / 1.0.3-9

Metadata

Package Version Patches format
lambda-align 1.0.3-9 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
set seqan cmake dir.patch | (download)

src/CMakeLists.txt | 2 2 + 0 - 0 !
1 file changed, 2 insertions(+)

 set seqan_dir to find cmake modules


force link rt pthread.patch | (download)

src/CMakeLists.txt | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

 enforce linking of -lrt -lpthread

This patch makes sure that these get linked even though they might
be missing in $SEQAN_LIBRARIES (until this is fixed in libseqan2-dev).

0003 Upgrade to SeqAn 2.5.0.patch | (download)

src/lambda.cpp | 10 5 + 5 - 0 !
src/lambda.hpp | 2 1 + 1 - 0 !
src/lambda_indexer.cpp | 10 5 + 5 - 0 !
src/lambda_indexer.hpp | 2 1 + 1 - 0 !
src/match.hpp | 2 1 + 1 - 0 !
src/misc.hpp | 6 3 + 3 - 0 !
src/options.hpp | 4 2 + 2 - 0 !
src/output.hpp | 7 4 + 3 - 0 !
src/radix_inplace.h | 2 1 + 1 - 0 !
tests/search_test_outfile.md5sums.gz | 14 8 + 6 - 0 !
10 files changed, 31 insertions(+), 28 deletions(-)

 upgrade to seqan 2.5.0.


0004 make test not depend on CXX.patch | (download)

tests/CMakeLists.txt | 2 2 + 0 - 0 !
1 file changed, 2 insertions(+)

 make test not depend on cxx


0005 Fix version.patch | (download)

src/CMakeLists.txt | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 fix version