Package: lambda-align2 / 2.0.0-9

Metadata

Package Version Patches format
lambda-align2 2.0.0-9 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
enable_tests | (download)

CMakeLists.txt | 4 2 + 2 - 0 !
tests/maintests.sh | 22 16 + 6 - 0 !
2 files changed, 18 insertions(+), 8 deletions(-)

 enable and update tests for lambda2

Skip checking the md5sums as they are not currently stable

Only the first 10 tests pass with this patch


32bit | (download)

src/search_algo.hpp | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

 fix 32bit compatibility
set seqan cmake dir.patch | (download)

src/CMakeLists.txt | 2 2 + 0 - 0 !
1 file changed, 2 insertions(+)

 set seqan_dir to find cmake modules
force link rt pthread.patch | (download)

src/CMakeLists.txt | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

 enforce linking of -lrt -lpthread
 This patch makes sure that these get linked even though they might
 be missing in $SEQAN_LIBRARIES (until this is fixed in libseqan2-dev).
glibc 2.32.patch | (download)

src/shared_misc.hpp | 1 0 + 1 - 0 !
1 file changed, 1 deletion(-)

 ftbfs with glibc 2.32, that will probably go in experimental or unstable soon.
 The following patch seems to fix the issue, due to a deprecated and removed header file