Package: libbpp-phyl | Debian Sources

Package: libbpp-phyl / 2.4.1-12

Package	Version	Patches format
libbpp-phyl	2.4.1-12	3.0 (quilt)

Patch	File delta	Description
spelling \| (download)	src/Bpp/Phyl/App/PhylogeneticsApplicationTools.cpp \| 8 4 + 4 - 0 ! src/Bpp/Phyl/Distance/DistanceEstimation.cpp \| 2 1 + 1 - 0 ! src/Bpp/Phyl/Io/BppOSubstitutionModelFormat.cpp \| 2 1 + 1 - 0 ! src/Bpp/Phyl/Io/IoPairedSiteLikelihoods.cpp \| 2 1 + 1 - 0 ! src/Bpp/Phyl/Likelihood/AbstractHomogeneousTreeLikelihood.h \| 4 2 + 2 - 0 ! src/Bpp/Phyl/Likelihood/AbstractNonHomogeneousTreeLikelihood.h \| 4 2 + 2 - 0 ! src/Bpp/Phyl/Likelihood/DRASRTreeLikelihoodData.cpp \| 4 2 + 2 - 0 ! src/Bpp/Phyl/Model/OneChangeRegisterTransitionModel.h \| 2 1 + 1 - 0 ! src/Bpp/Phyl/Model/SubstitutionModelSet.h \| 4 2 + 2 - 0 ! 9 files changed, 16 insertions(+), 16 deletions(-)	typo fixes
unforce cxxflags.patch \| (download)	CMakeLists.txt \| 2 1 + 1 - 0 ! 1 file changed, 1 insertion(+), 1 deletion(-)	do not override debian cxx flags
remove_test_likelihood_nh.patch \| (download)	test/test_likelihood_nh.cpp \| 157 0 + 157 - 0 ! 1 file changed, 157 deletions(-)	---
cmake 4.patch \| (download)	CMakeLists.txt \| 2 1 + 1 - 0 ! 1 file changed, 1 insertion(+), 1 deletion(-)	bump cmake compatibility version to 3.10. This fixes failure to build with cmake 4.

Patch	File delta	Description
spelling \| (download)	src/Bpp/Phyl/App/PhylogeneticsApplicationTools.cpp \| 8 4 + 4 - 0 ! src/Bpp/Phyl/Distance/DistanceEstimation.cpp \| 2 1 + 1 - 0 ! src/Bpp/Phyl/Io/BppOSubstitutionModelFormat.cpp \| 2 1 + 1 - 0 ! src/Bpp/Phyl/Io/IoPairedSiteLikelihoods.cpp \| 2 1 + 1 - 0 ! src/Bpp/Phyl/Likelihood/AbstractHomogeneousTreeLikelihood.h \| 4 2 + 2 - 0 ! src/Bpp/Phyl/Likelihood/AbstractNonHomogeneousTreeLikelihood.h \| 4 2 + 2 - 0 ! src/Bpp/Phyl/Likelihood/DRASRTreeLikelihoodData.cpp \| 4 2 + 2 - 0 ! src/Bpp/Phyl/Model/OneChangeRegisterTransitionModel.h \| 2 1 + 1 - 0 ! src/Bpp/Phyl/Model/SubstitutionModelSet.h \| 4 2 + 2 - 0 ! 9 files changed, 16 insertions(+), 16 deletions(-)	typo fixes
unforce cxxflags.patch \| (download)	CMakeLists.txt \| 2 1 + 1 - 0 ! 1 file changed, 1 insertion(+), 1 deletion(-)	do not override debian cxx flags
remove_test_likelihood_nh.patch \| (download)	test/test_likelihood_nh.cpp \| 157 0 + 157 - 0 ! 1 file changed, 157 deletions(-)	---
cmake 4.patch \| (download)	CMakeLists.txt \| 2 1 + 1 - 0 ! 1 file changed, 1 insertion(+), 1 deletion(-)	bump cmake compatibility version to 3.10. This fixes failure to build with cmake 4.