Package: libcolt-free-java / 1.2.0+dfsg-8

Metadata

Package Version Patches format
libcolt-free-java 1.2.0+dfsg-8 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
freehep aida.patch | (download)

src/cern/colt/matrix/DoubleMatrix1D.java | 4 4 + 0 - 0 !
src/cern/colt/matrix/DoubleMatrix2D.java | 4 4 + 0 - 0 !
src/cern/colt/matrix/DoubleMatrix3D.java | 4 4 + 0 - 0 !
src/cern/colt/matrix/linalg/Property.java | 4 2 + 2 - 0 !
4 files changed, 14 insertions(+), 2 deletions(-)

 try to get rid of remainings requiring non-free hep aida code
 See https://lists.debian.org/debian-med/2015/02/msg00174.html
 .
 This patch does the second part of this mail commenting the toString() and 
 viewSorted() methods from
    src/cern/colt/matrix/DoubleMatrix1D.java
    src/cern/colt/matrix/DoubleMatrix2D.java
    src/cern/colt/matrix/DoubleMatrix3D.java
 .
 FIXME: I have no idea how to deal with
    src/cern/colt/matrix/linalg/Property.java


fix_invalid_encoding.patch | (download)

src/cern/colt/GenericPermuting.java | 2 1 + 1 - 0 !
src/cern/colt/GenericSorting.java | 2 1 + 1 - 0 !
src/cern/colt/Partitioning.java | 2 1 + 1 - 0 !
src/cern/colt/Sorting.java | 2 1 + 1 - 0 !
src/cern/colt/Version.java | 2 1 + 1 - 0 !
src/cern/colt/list/AbstractBooleanList.java | 2 1 + 1 - 0 !
src/cern/colt/list/AbstractByteList.java | 2 1 + 1 - 0 !
src/cern/colt/list/AbstractCharList.java | 2 1 + 1 - 0 !
src/cern/colt/list/AbstractDoubleList.java | 2 1 + 1 - 0 !
src/cern/colt/list/AbstractFloatList.java | 2 1 + 1 - 0 !
src/cern/colt/list/AbstractIntList.java | 2 1 + 1 - 0 !
src/cern/colt/list/AbstractLongList.java | 2 1 + 1 - 0 !
src/cern/colt/list/AbstractShortList.java | 2 1 + 1 - 0 !
src/cern/colt/list/BooleanArrayList.java | 2 1 + 1 - 0 !
src/cern/colt/list/ByteArrayList.java | 2 1 + 1 - 0 !
src/cern/colt/list/CharArrayList.java | 2 1 + 1 - 0 !
src/cern/colt/list/DoubleArrayList.java | 2 1 + 1 - 0 !
src/cern/colt/list/FloatArrayList.java | 2 1 + 1 - 0 !
src/cern/colt/list/IntArrayList.java | 2 1 + 1 - 0 !
src/cern/colt/list/LongArrayList.java | 2 1 + 1 - 0 !
src/cern/colt/list/MinMaxNumberList.java | 2 1 + 1 - 0 !
src/cern/colt/list/ObjectArrayList.java | 2 1 + 1 - 0 !
src/cern/colt/list/ShortArrayList.java | 2 1 + 1 - 0 !
src/cern/colt/list/adapter/DoubleListAdapter.java | 2 1 + 1 - 0 !
src/cern/colt/list/adapter/FloatListAdapter.java | 2 1 + 1 - 0 !
src/cern/colt/list/adapter/IntListAdapter.java | 2 1 + 1 - 0 !
src/cern/colt/list/adapter/LongListAdapter.java | 2 1 + 1 - 0 !
src/cern/colt/list/adapter/ObjectListAdapter.java | 2 1 + 1 - 0 !
src/cern/colt/map/AbstractDoubleIntMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/AbstractIntDoubleMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/AbstractIntIntMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/AbstractIntObjectMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/AbstractLongObjectMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/OpenDoubleIntHashMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/OpenIntDoubleHashMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/OpenIntIntHashMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/OpenIntObjectHashMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/OpenLongObjectHashMap.java | 2 1 + 1 - 0 !
src/cern/colt/map/QuickOpenIntIntHashMap.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/DoubleFactory1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/DoubleFactory2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/DoubleFactory3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/DoubleMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/DoubleMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/DoubleMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/ObjectFactory1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/ObjectFactory2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/ObjectFactory3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/ObjectMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/ObjectMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/ObjectMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/AbstractFormatter.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/Benchmark.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/DelegateDoubleMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/DenseDoubleMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/DenseDoubleMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/DenseDoubleMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/DenseObjectMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/DenseObjectMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/DenseObjectMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/RCDoubleMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/RCMDoubleMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedDenseDoubleMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedDenseDoubleMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedDenseDoubleMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedDenseObjectMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedDenseObjectMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedDenseObjectMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedSparseDoubleMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedSparseDoubleMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedSparseDoubleMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedSparseObjectMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedSparseObjectMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SelectedSparseObjectMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SparseDoubleMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SparseDoubleMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SparseDoubleMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SparseObjectMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SparseObjectMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/SparseObjectMatrix3D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/TridiagonalDoubleMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/WrapperDoubleMatrix1D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/impl/WrapperDoubleMatrix2D.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/Algebra.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/Blas.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/CholeskyDecomposition.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/Diagonal.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/EigenvalueDecomposition.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/LUDecomposition.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/QRDecomposition.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/SeqBlas.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/SingularValueDecomposition.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/Smp.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/linalg/SmpBlas.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/objectalgo/Formatter.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/objectalgo/ObjectMatrix1DComparator.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/objectalgo/ObjectMatrix2DComparator.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/objectalgo/Partitioning.java | 2 1 + 1 - 0 !
src/cern/colt/matrix/objectalgo/Sorting.java | 2 1 + 1 - 0 !
src/cern/jet/math/Functions.java | 2 1 + 1 - 0 !
src/cern/jet/math/IntFunctions.java | 2 1 + 1 - 0 !
src/cern/jet/random/AbstractDistribution.java | 2 1 + 1 - 0 !
src/cern/jet/random/Beta.java | 2 1 + 1 - 0 !
src/cern/jet/random/Binomial.java | 2 1 + 1 - 0 !
src/cern/jet/random/BreitWigner.java | 2 1 + 1 - 0 !
src/cern/jet/random/BreitWignerMeanSquare.java | 2 1 + 1 - 0 !
src/cern/jet/random/ChiSquare.java | 2 1 + 1 - 0 !
src/cern/jet/random/Distributions.java | 2 1 + 1 - 0 !
src/cern/jet/random/Empirical.java | 2 1 + 1 - 0 !
src/cern/jet/random/EmpiricalWalker.java | 2 1 + 1 - 0 !
src/cern/jet/random/Exponential.java | 2 1 + 1 - 0 !
src/cern/jet/random/ExponentialPower.java | 2 1 + 1 - 0 !
src/cern/jet/random/Fun.java | 2 1 + 1 - 0 !
src/cern/jet/random/Gamma.java | 2 1 + 1 - 0 !
src/cern/jet/random/HyperGeometric.java | 2 1 + 1 - 0 !
src/cern/jet/random/Hyperbolic.java | 2 1 + 1 - 0 !
src/cern/jet/random/Logarithmic.java | 2 1 + 1 - 0 !
src/cern/jet/random/NegativeBinomial.java | 2 1 + 1 - 0 !
src/cern/jet/random/Normal.java | 2 1 + 1 - 0 !
src/cern/jet/random/Poisson.java | 2 1 + 1 - 0 !
src/cern/jet/random/PoissonSlow.java | 2 1 + 1 - 0 !
src/cern/jet/random/StudentT.java | 2 1 + 1 - 0 !
src/cern/jet/random/Uniform.java | 2 1 + 1 - 0 !
src/cern/jet/random/VonMises.java | 2 1 + 1 - 0 !
src/cern/jet/random/Zeta.java | 2 1 + 1 - 0 !
src/cern/jet/random/engine/Benchmark.java | 2 1 + 1 - 0 !
src/cern/jet/random/engine/DRand.java | 2 1 + 1 - 0 !
src/cern/jet/random/engine/MersenneTwister.java | 2 1 + 1 - 0 !
src/cern/jet/random/engine/MersenneTwister64.java | 2 1 + 1 - 0 !
src/cern/jet/random/engine/RandomEngine.java | 2 1 + 1 - 0 !
src/cern/jet/random/engine/RandomGenerator.java | 2 1 + 1 - 0 !
src/cern/jet/random/sampling/RandomSampler.java | 2 1 + 1 - 0 !
src/cern/jet/random/sampling/RandomSamplingAssistant.java | 2 1 + 1 - 0 !
src/cern/jet/random/sampling/WeightedRandomSampler.java | 2 1 + 1 - 0 !
src/cern/jet/stat/Descriptive.java | 2 1 + 1 - 0 !
src/cern/jet/stat/quantile/DoubleBuffer.java | 2 1 + 1 - 0 !
src/cern/jet/stat/quantile/DoubleQuantileEstimator.java | 2 1 + 1 - 0 !
src/cern/jet/stat/quantile/EquiDepthHistogram.java | 2 1 + 1 - 0 !
src/cern/jet/stat/quantile/ExactDoubleQuantileFinder.java | 2 1 + 1 - 0 !
src/cern/jet/stat/quantile/KnownDoubleQuantileEstimator.java | 2 1 + 1 - 0 !
src/cern/jet/stat/quantile/QuantileFinderFactory.java | 2 1 + 1 - 0 !
src/cern/jet/stat/quantile/QuantileFinderTest.java | 2 1 + 1 - 0 !
src/cern/jet/stat/quantile/UnknownDoubleQuantileEstimator.java | 2 1 + 1 - 0 !
src/cern/jet/stat/quantile/Utils.java | 2 1 + 1 - 0 !
144 files changed, 144 insertions(+), 144 deletions(-)

 replace invalid encoding of copyright symbol which makes build fail in java 9
   May be this can be done also in d/rules by sed expression instead of a patch.
   There is an example for those files that are not caught by this patch
Bug-Debian: https://bugs.debian.org/893303
fork join.patch | (download)

src/cern/colt/matrix/linalg/Smp.java | 25 11 + 14 - 0 !
src/cern/colt/matrix/linalg/SmpBlas.java | 30 13 + 17 - 0 !
2 files changed, 24 insertions(+), 31 deletions(-)

 replaces the old oswego concurrent library with the standard java 7 fork/join framework