Package: m2m-aligner / 1.2-2

Metadata

Package Version Patches format
m2m-aligner 1.2-2 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
1001_fix_mispelling_errors.patch | (download)

mmAligner.cpp | 2 1 + 1 - 0 !
mmEM.cpp | 2 1 + 1 - 0 !
mmEM.h | 2 1 + 1 - 0 !
param.h | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/ArgException_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/ArgTraits_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/Arg_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/CmdLineInterface_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/CmdLineOutput_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/CmdLine_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/Constraint_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/DocBookOutput_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/HelpVisitor_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/IgnoreRestVisitor_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/MultiArg_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/MultiSwitchArg_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/OptionalUnlabeledTracker_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/StandardTraits_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/StdOutput_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/SwitchArg_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/UnlabeledMultiArg_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/UnlabeledValueArg_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/ValueArg_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/ValuesConstraint_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/VersionVisitor_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/Visitor_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/XorHandler_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/html/ZshCompletionOutput_8h_source.html | 2 1 + 1 - 0 !
tclap-1.2.1/docs/index.html | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/Arg.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/ArgException.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/ArgTraits.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/CmdLine.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/CmdLineInterface.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/CmdLineOutput.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/Constraint.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/DocBookOutput.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/HelpVisitor.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/IgnoreRestVisitor.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/MultiArg.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/MultiSwitchArg.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/OptionalUnlabeledTracker.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/StandardTraits.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/StdOutput.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/SwitchArg.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/UnlabeledMultiArg.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/UnlabeledValueArg.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/ValueArg.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/ValuesConstraint.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/VersionVisitor.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/Visitor.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/XorHandler.h | 2 1 + 1 - 0 !
tclap-1.2.1/include/tclap/ZshCompletionOutput.h | 2 1 + 1 - 0 !
util.h | 2 1 + 1 - 0 !
54 files changed, 54 insertions(+), 54 deletions(-)

 fixes some typos
1002_fix_makefile_variables.patch | (download)

makefile | 4 2 + 2 - 0 !
1 file changed, 2 insertions(+), 2 deletions(-)

 fixes some variables usage in makefile
1003_use_std_log_instead_of_logl.patch | (download)

mmEM.cpp | 12 6 + 6 - 0 !
1 file changed, 6 insertions(+), 6 deletions(-)

 replaces logl with std::log
1004_fix_compilation_warnings.patch | (download)

mmAligner.cpp | 6 3 + 3 - 0 !
mmEM.cpp | 96 47 + 49 - 0 !
param.h | 6 3 + 3 - 0 !
util.h | 2 1 + 1 - 0 !
4 files changed, 54 insertions(+), 56 deletions(-)

 fixes many compilation warnings