Package: mauve-aligner / 2.4.0+4736-3

Metadata

Package Version Patches format
mauve-aligner 2.4.0+4736-3 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
build_xml.patch | (download)

build.xml | 234 2 + 232 - 0 !
1 file changed, 2 insertions(+), 232 deletions(-)

 drop osx specific things from build.xml,
 Prevent build from calling home at build time


debian_classes.patch | (download)

.classpath | 18 7 + 11 - 0 !
build.xml | 20 9 + 11 - 0 !
2 files changed, 16 insertions(+), 22 deletions(-)

 use debian packaged classes


use_JConsole_of_zeus jscl_properly.patch | (download)

src/org/gel/mauve/MyConsole.java | 16 9 + 7 - 0 !
src/org/gel/mauve/gui/MauveFrame.java | 3 1 + 2 - 0 !
2 files changed, 10 insertions(+), 9 deletions(-)

 adapt to latest libzeus-jscl-java version
 For a detailed explanation see the debian-java mailing list archive
 https://lists.debian.org/debian-java/2015/04/msg00106.html


do_not_use_goose_jar.patch | (download)

.classpath | 1 0 + 1 - 0 !
build.xml | 1 0 + 1 - 0 !
src/org/gel/mauve/gaggle/SampleGoose.java | 696 0 + 696 - 0 !
3 files changed, 698 deletions(-)

 do not use goose.jar since it is not used accorcing to upstream
 see: https://lists.debian.org/debian-med/2015/04/msg00069.html


no_ext_dir_at_all.patch | (download)

build.xml | 28 0 + 28 - 0 !
1 file changed, 28 deletions(-)

 some remainings of mentioning ext/ in build.xml were breaking
 the build.  Just removed everything which is possibly a bit brute force
 but works.