Package: mdtraj / 1.11.0-1

Metadata

Package Version Patches format
mdtraj 1.11.0-1 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
docs_use_local_mathjax.patch | (download)

docs/conf.py | 2 2 + 0 - 0 !
1 file changed, 2 insertions(+)

 use local mathjax

build_dir_pybuild.patch | (download)

basesetup.py | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 set proper build dir for pybuild

python_hashbang.patch | (download)

mdtraj/utils/unit/basedimension.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/baseunit.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/constants.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/doctests.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/prefix.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/quantity.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/standard_dimensions.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/unit.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/unit_definitions.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/unit_math.py | 2 1 + 1 - 0 !
mdtraj/utils/unit/unit_operators.py | 2 1 + 1 - 0 !
11 files changed, 11 insertions(+), 11 deletions(-)

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32bit_skip_image_molecule.patch | (download)

tests/test_trajectory.py | 3 3 + 0 - 0 !
1 file changed, 3 insertions(+)

 skip image_molecule test which segfaults on 32-bit systems, see mdtraj issue #1591

test_relax_tol.patch | (download)

tests/test_distance.py | 2 1 + 1 - 0 !
tests/test_order.py | 2 1 + 1 - 0 !
2 files changed, 2 insertions(+), 2 deletions(-)

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rename mdconvert mdtraj.patch | (download)

docs/index.rst | 3 2 + 1 - 0 !
docs/mdconvert.rst | 12 7 + 5 - 0 !
examples/simulation-with-openmm.ipynb | 2 1 + 1 - 0 !
setup.py | 2 1 + 1 - 0 !
tests/test_mdconvert.py | 6 3 + 3 - 0 !
5 files changed, 14 insertions(+), 11 deletions(-)

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drop_notebook_in_docs.patch | (download)

docs/conf.py | 1 0 + 1 - 0 !
1 file changed, 1 deletion(-)

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test_increase_timeout.patch | (download)

examples/test_examples.py | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

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openmm_version_skip.patch | (download)

tests/test_topology.py | 4 4 + 0 - 0 !
1 file changed, 4 insertions(+)

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