Package: microbiomeutil / 20101212+dfsg1-1

Metadata

Package Version Patches format
microbiomeutil 20101212+dfsg1-1 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
fix_perl_interpreter.patch | (download)

ChimeraSlayer/PerlLib/Fasta_reader.pm | 2 0 + 2 - 0 !
NAST-iEr/PerlLib/Fasta_reader.pm | 2 0 + 2 - 0 !
RESOURCES/genus_counter.pl | 2 1 + 1 - 0 !
WigeoN/PerlLib/Fasta_reader.pm | 2 0 + 2 - 0 !
4 files changed, 1 insertion(+), 7 deletions(-)

 remove wrong or fix perl interpreter location


find_relocated_resources.patch | (download)

ChimeraSlayer/ChimeraSlayer.pl | 4 2 + 2 - 0 !
ChimeraSlayer/util/CS_add_taxonomy.pl | 2 1 + 1 - 0 !
NAST-iEr/run_NAST-iEr.pl | 4 2 + 2 - 0 !
WigeoN/run_WigeoN.pl | 4 2 + 2 - 0 !
4 files changed, 7 insertions(+), 7 deletions(-)

 adapt path of some resources to debian installation


find_relocated_libraries.patch | (download)

ChimeraSlayer/ChimeraSlayer.pl | 4 3 + 1 - 0 !
NAST-iEr/run_NAST-iEr.pl | 4 3 + 1 - 0 !
WigeoN/WigeoN.pl | 4 3 + 1 - 0 !
WigeoN/run_CM_to_WigeoN.pl | 6 4 + 2 - 0 !
WigeoN/run_WigeoN.pl | 4 3 + 1 - 0 !
5 files changed, 16 insertions(+), 6 deletions(-)

---
hardening.patch | (download)

NAST-iEr/Makefile | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 enable propagation of hardening options


enable_tests_in_local_dir.patch | (download)

ChimeraSlayer/ChimeraParentSelector/chimeraParentSelector.pl | 2 1 + 1 - 0 !
ChimeraSlayer/ChimeraSlayer.pl | 21 21 + 0 - 0 !
ChimeraSlayer/sample_data/runMe.sh | 6 3 + 3 - 0 !
ChimeraSlayer/util/CS_add_taxonomy.pl | 10 9 + 1 - 0 !
NAST-iEr/run_NAST-iEr.pl | 22 21 + 1 - 0 !
NAST-iEr/sample_data/runMe.sh | 4 2 + 2 - 0 !
6 files changed, 57 insertions(+), 8 deletions(-)

 to run build time tests enable running the scripts
 from build path