scripts/Makefile | 48 23 + 25 - 0 !
1 file changed, 23 insertions(+), 25 deletions(-)

 make sure scripts will use the installation path instead of
 the temporary build path

docs/web/index.html | 14 7 + 7 - 0 !
1 file changed, 7 insertions(+), 7 deletions(-)

 some pdfs were removed and have to be downloaded from the upstream website instead.

docs/maxmat3man.tex | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 enable building with recent tetex

docs/web/examples/index.html | 3 1 + 2 - 0 !
docs/web/index.html | 5 1 + 4 - 0 !
docs/web/manual/index.html | 3 1 + 2 - 0 !
3 files changed, 3 insertions(+), 8 deletions(-)

 remove sf privacy breach script from docs

Makefile | 2 1 + 1 - 0 !
src/tigr/Makefile | 6 3 + 3 - 0 !
2 files changed, 4 insertions(+), 4 deletions(-)

 propagate hardening options

src/kurtz/libbasedir/procopt.c | 2 1 + 1 - 0 !
src/kurtz/mm3src/procmaxmat.c | 2 1 + 1 - 0 !
src/tigr/delta.hh | 2 1 + 1 - 0 !
src/tigr/mgaps.cc | 2 1 + 1 - 0 !
src/tigr/postnuc.cc | 8 4 + 4 - 0 !
src/tigr/postpro.cc | 10 5 + 5 - 0 !
6 files changed, 13 insertions(+), 13 deletions(-)

 spelling

src/tigr/Makefile | 8 7 + 1 - 0 !
src/tigr/delta2blocks.cc | 647 647 + 0 - 0 !
src/tigr/delta2maf.cc | 793 793 + 0 - 0 !
src/tigr/tigrinc.cc | 86 85 + 1 - 0 !
src/tigr/tigrinc.hh | 3 3 + 0 - 0 !
5 files changed, 1535 insertions(+), 2 deletions(-)

 the tool mugsy provides an old mummer code copy (version 3.20)
 with a additional tools delta2maf and delta2blocks.
 Since the mummer copy in mugsy does not feature all the mummer patches we
 rather inject the additional tool right into the Debian package.
 .
 The source can be found in
    svn://svn.code.sf.net/p/mugsy/code/trunk

src/tigr/delta2maf.cc | 23 20 + 3 - 0 !
1 file changed, 20 insertions(+), 3 deletions(-)

 improve performance of delta2maf

scripts/mummerplot.pl | 12 6 + 6 - 0 !
1 file changed, 6 insertions(+), 6 deletions(-)

 fix perl compatibility error in mummerplot

Makefile | 4 0 + 4 - 0 !
scripts/Makefile | 1 0 + 1 - 0 !
2 files changed, 5 deletions(-)

 remove checks for csh
 While the package can safely be built without csh, there are still a few
 checks that are causing various error messages at build time.  This patch
 removes them.

README | 2 1 + 1 - 0 !
docs/run-mummer1.README | 10 5 + 5 - 0 !
docs/web/manual/index.html | 9 4 + 5 - 0 !
3 files changed, 10 insertions(+), 11 deletions(-)

 remove csh from docs

docs/maxmat3man.tex | 2 2 + 0 - 0 !
1 file changed, 2 insertions(+)

 do not publish build date in documentation to make build reproducible