makefile | 15 0 + 15 - 0 !
makefile.old | 15 15 + 0 - 0 !
2 files changed, 15 insertions(+), 15 deletions(-)

 rename original makefile

prion.fa | 6 6 + 0 - 0 !
1 file changed, 6 insertions(+)

 add an example
 Upstream has an example in the text documentation file.

seg.c | 1 1 + 0 - 0 !
1 file changed, 1 insertion(+)

 add missing include file

genwin.c | 9 5 + 4 - 0 !
1 file changed, 5 insertions(+), 4 deletions(-)

 add missing include file and fix type casts

AUTHORS | 4 4 + 0 - 0 !
COPYING | 24 24 + 0 - 0 !
ChangeLog | 52 52 + 0 - 0 !
Makefile.am | 14 14 + 0 - 0 !
NEWS | 1 1 + 0 - 0 !
configure.ac | 7 7 + 0 - 0 !
6 files changed, 102 insertions(+)

 using autotools build system
 Upstream uses a simple makefile.

ncbi-seg.pod | 290 290 + 0 - 0 !
seg.doc | 82 41 + 41 - 0 !
2 files changed, 331 insertions(+), 41 deletions(-)

 add man page source in pod format
 Upstream has documentation in text format - the basis of this patch.

genwin.c | 22 11 + 11 - 0 !
seg.c | 28 14 + 14 - 0 !
2 files changed, 25 insertions(+), 25 deletions(-)

 make it compile with clang