interfaces/align/align-access.h | 2 1 + 1 - 0 !
interfaces/sra/abi.h | 2 1 + 1 - 0 !
interfaces/sra/fastq.h | 2 1 + 1 - 0 !
interfaces/sra/illumina.h | 2 1 + 1 - 0 !
interfaces/sra/sff.h | 2 1 + 1 - 0 !
libs/blast/blast-mgr.c | 28 14 + 14 - 0 !
libs/kns/linux/sysendpoint.c | 4 2 + 2 - 0 !
libs/krypto/encfilev2.c | 2 1 + 1 - 0 !
libs/sra/reader-cmn.h | 2 1 + 1 - 0 !
9 files changed, 23 insertions(+), 23 deletions(-)

 fix some spelling issues

interfaces/cc/gcc/i386/arch-impl.h | 7 7 + 0 - 0 !
1 file changed, 7 insertions(+)

 add missing implementation of uint64_msbit for i386
 Without this definition, we get a "successful" library build with undefined
 symbols on i386.  We can use the same implementation of this function as on
 x86_64.

libs/vxf/zstd.c | 2 1 + 1 - 0 !
1 file changed, 1 insertion(+), 1 deletion(-)

 use debian packaged libzstd

libs/CMakeLists.txt | 3 1 + 2 - 0 !
libs/ncbi-vdb/CMakeLists.posix.txt | 4 2 + 2 - 0 !
libs/ncbi-vdb/CMakeLists.txt | 6 3 + 3 - 0 !
test/CMakeLists.txt | 5 2 + 3 - 0 !
4 files changed, 8 insertions(+), 10 deletions(-)

 set linker flags properly

build/common.cmake | 27 14 + 13 - 0 !
1 file changed, 14 insertions(+), 13 deletions(-)

 use cmake mechanism for soname

libs/align/CMakeLists.txt | 1 1 + 0 - 0 !
1 file changed, 1 insertion(+)

 upstream creates static library with versioning / linking scheme
 which looks as it would be intended to create a shared library.  This patch
 really created this shared library (which ends up in a seprate binary package)

build/env.cmake | 5 5 + 0 - 0 !
1 file changed, 5 insertions(+)

---

test/vdb/CMakeLists.txt | 2 2 + 0 - 0 !
1 file changed, 2 insertions(+)

---

build/common.cmake | 5 2 + 3 - 0 !
1 file changed, 2 insertions(+), 3 deletions(-)

---

py_vdb/vdb.py | 8 5 + 3 - 0 !
1 file changed, 5 insertions(+), 3 deletions(-)

---

.gitignore | 6 6 + 0 - 0 !
1 file changed, 6 insertions(+)

 update .gitignore from debian packaging branch

The Debian packaging git branch contains these updates to the upstream
.gitignore file(s).  This patch is autogenerated, to provide these
updates to users of the official Debian archive view of the package.

[dgit (12.11) update-gitignore]