Package: obitools / 1.2.12+dfsg-2

Metadata

Package Version Patches format
obitools 1.2.12+dfsg-2 3.0 (quilt)

Patch series

view the series file
Patch File delta Description
use_debian_libs | (download)

distutils.ext/obidistutils/serenity/__init__.py | 2 1 + 1 - 0 !
distutils.ext/obidistutils/serenity/checkpackage.py | 43 1 + 42 - 0 !
setup.py | 4 2 + 2 - 0 !
3 files changed, 4 insertions(+), 45 deletions(-)

 installer uses pip and virtualenv for install,
 this patch removes this specific install to install in Debian dirs
 and use Debian libs
fix_path_interpreter | (download)

src/ali2consensus.py | 2 1 + 1 - 0 !
src/ecodbtaxstat.py | 2 1 + 1 - 0 !
src/ecotag.py | 2 1 + 1 - 0 !
src/ecotaxspecificity.py | 2 1 + 1 - 0 !
src/ecotaxstat.py | 2 1 + 1 - 0 !
src/extractreads.py | 1 1 + 0 - 0 !
src/extractreads2.py | 1 1 + 0 - 0 !
src/illuminapairedend.py | 2 1 + 1 - 0 !
src/ngsfilter.py | 2 1 + 1 - 0 !
src/obiaddtaxids.py | 2 1 + 1 - 0 !
src/obiannotate.py | 2 1 + 1 - 0 !
src/obiclean.py | 2 1 + 1 - 0 !
src/obicomplement.py | 2 1 + 1 - 0 !
src/obiconvert.py | 2 1 + 1 - 0 !
src/obicount.py | 2 1 + 1 - 0 !
src/obicut.py | 2 1 + 1 - 0 !
src/obidistribute.py | 2 1 + 1 - 0 !
src/obiextract.py | 2 1 + 1 - 0 !
src/obigrep.py | 2 1 + 1 - 0 !
src/obihead.py | 2 1 + 1 - 0 !
src/obijoinpairedend.py | 2 1 + 1 - 0 !
src/obipr2.py | 2 1 + 1 - 0 !
src/obisample.py | 2 1 + 1 - 0 !
src/obiselect.py | 2 1 + 1 - 0 !
src/obisilva.py | 2 1 + 1 - 0 !
src/obisort.py | 2 1 + 1 - 0 !
src/obisplit.py | 2 1 + 1 - 0 !
src/obistat.py | 2 1 + 1 - 0 !
src/obitab.py | 2 1 + 1 - 0 !
src/obitail.py | 2 1 + 1 - 0 !
src/obitaxonomy.py | 2 1 + 1 - 0 !
src/obitools/barcodecoverage/calcBc.py | 2 1 + 1 - 0 !
src/obitools/barcodecoverage/drawBcTree.py | 2 1 + 1 - 0 !
src/obitools/barcodecoverage/findErrors.py | 2 1 + 1 - 0 !
src/obitools/barcodecoverage/readFiles.py | 2 1 + 1 - 0 !
src/obitools/barcodecoverage/writeBcTree.py | 2 1 + 1 - 0 !
src/obitools/solexaPairEnd.py | 2 1 + 1 - 0 !
src/obiuniq.py | 2 1 + 1 - 0 !
src/oligotag.py | 2 1 + 1 - 0 !
39 files changed, 39 insertions(+), 37 deletions(-)

 use debian python